Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033843_P007 | Maize | nucleus | 86.72 | 87.88 |
| Zm00001d013380_P001 | Maize | nucleus | 83.15 | 83.93 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 56.21 | 63.9 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 63.9 | 63.55 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 63.74 | 63.35 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 62.27 | 62.8 |
| CDY55018 | Canola | mitochondrion | 4.58 | 53.64 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.8 | 41.53 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 40.92 | 39.07 |
| Bra006786.1-P | Field mustard | nucleus | 27.87 | 34.29 |
| CDX88655 | Canola | nucleus | 27.8 | 34.23 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 37.03 | 34.05 |
| CDY43886 | Canola | nucleus | 30.67 | 34.02 |
| Bra002677.1-P | Field mustard | nucleus | 30.59 | 33.62 |
| KRH37905 | Soybean | nucleus | 34.39 | 33.61 |
| KRH12930 | Soybean | nucleus | 33.15 | 32.75 |
| AT5G58040.1 | Thale cress | nucleus | 30.28 | 32.61 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 36.72 | 32.09 |
| CDY11833 | Canola | nucleus | 26.24 | 31.74 |
| Solyc07g005320.2.1 | Tomato | nucleus | 32.69 | 30.51 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 13.59 | 29.97 |
| KXG39524 | Sorghum | cytosol | 2.41 | 21.99 |
Protein Annotations
| MapMan:16.2.1.2.6 | UniProt:A0A1B6QIE2 | ncoils:Coil | InterPro:Fip1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0005847 | GO:GO:0006139 | GO:GO:0006378 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0098789 | EnsemblPlants:KXG37677 | ProteinID:KXG37677 | ProteinID:KXG37677.1 | PFAM:PF05182 |
| PANTHER:PTHR36884 | EnsemblPlantsGene:SORBI_3001G107900 | UniParc:UPI00081AD2A1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:-:8351880..8364841
Molecular Weight (calculated)
143199.0 Da
IEP (calculated)
5.033
GRAVY (calculated)
-1.379
Length
1288 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEDDEFGDL YTDILIPTQT PASTSALSNS VPVETLPRPP PNPNPTPVAA AAVEEDDDWL LGGSDPIPGV DPTGDWADED DDGGEPAPPA KHEVAAPAKR
0101: PAAADDLDPL MGGGAGDSGP AIPGLSSSAA AGAAGSDEWD SDSEDDIQIV LNETDGRRGL GEDEGDDEDG EDLVIVADGP HITGMEEQDW GEDPAAAGAE
0201: GERKDGGEPG KTVAAPGGRI GYSGGGPGFH QQHHSMFKYV RPGAPGASVG GVPGGPGQFR PPGPSGPFSG RGRGDWRPAA GRGMNKSFHS GYGITPWGGS
0301: GRGFGGLDFA LPPHKTIFDI DVETAFEEKP WKFPGADISD FFNFGLDEEK WKDFCKQLDQ LRLESTMQSR IRVYESGRSE QDYDPDLPPE LAAVTGHPDI
0401: SADSRNKTDN SHTDFSAQGR GPANVRTPVM TGRPIQVETN YTDRFPSVDS RPHRMRESDS VIEIVCQGRD SMDDETVDQT EKDSQGGNKG VHDVEEGKSY
0501: PSDKINNSGY NSNSVIKTEH KRQLPVSSES DMLSTDVNAH SPPSYKTRGS PRGSRSLKGS SLGQNSIRET ESSNEVIPRQ SSSKRHHDSR KENLVEGSEN
0601: KGDSEGSLAA NDDVADKLST EDHFDGGGGG GDDDDDDKLA LVGSVEVDGD DATSDPNTPS DANEDDSLVH SDKKHKHISV VEQPTGHNSS EADELRASEN
0701: SKGRSGSSKD QQKRLESGEE VLQDRQSRRV NNVRRHHDAE ERNLRRKDEY SRDVKSDLER SHLPSRGRED VHQSYANRDR VDMRGRSYDR VRETEIWPRR
0801: DDGVHNRRAK EEDLRLEYNV EGGARHRNKV RPIDRNDRDE DHSRKRLDDG DWRGSRQRER GDVVLNRRES DDSHIKRNKD DENLRRLKPE NEDMVVAHGY
0901: RARDDNNRRK KERDDGIDQK RRDDSGRLRE KADDRYHAKQ KDDNWRQRER EDRQRPKHEN ALTLQKEEGR GTGRGSRMMD DKLVSGGRKK DEPRSSVLSK
1001: DTQERTRQNE PSRRGQGVEE NNVQNKGRSD VHPRDDNSNI ERNSRQEKQN NNRLSGSSDA RHAGRDRHRD STRKGRGSEL GEHDHRSSKR RREDHESHRS
1101: GKVETKEVNE QESSRGHATL SKKSQNPQPD NSLLNQVEED AISDDENHED SRRGRSKLER WTSHKEIEYS NIDDDSTQTF PTIKADAEAD EVGKSEVSAA
1201: VGNSDINSNV DTGQTSDKMT EERDRHLDTV ERLKRRSERF KLPMPGEKDA PQSKKVDTEV QPPQNESAAV DMEVKPERPA RKRRWTGS
0101: PAAADDLDPL MGGGAGDSGP AIPGLSSSAA AGAAGSDEWD SDSEDDIQIV LNETDGRRGL GEDEGDDEDG EDLVIVADGP HITGMEEQDW GEDPAAAGAE
0201: GERKDGGEPG KTVAAPGGRI GYSGGGPGFH QQHHSMFKYV RPGAPGASVG GVPGGPGQFR PPGPSGPFSG RGRGDWRPAA GRGMNKSFHS GYGITPWGGS
0301: GRGFGGLDFA LPPHKTIFDI DVETAFEEKP WKFPGADISD FFNFGLDEEK WKDFCKQLDQ LRLESTMQSR IRVYESGRSE QDYDPDLPPE LAAVTGHPDI
0401: SADSRNKTDN SHTDFSAQGR GPANVRTPVM TGRPIQVETN YTDRFPSVDS RPHRMRESDS VIEIVCQGRD SMDDETVDQT EKDSQGGNKG VHDVEEGKSY
0501: PSDKINNSGY NSNSVIKTEH KRQLPVSSES DMLSTDVNAH SPPSYKTRGS PRGSRSLKGS SLGQNSIRET ESSNEVIPRQ SSSKRHHDSR KENLVEGSEN
0601: KGDSEGSLAA NDDVADKLST EDHFDGGGGG GDDDDDDKLA LVGSVEVDGD DATSDPNTPS DANEDDSLVH SDKKHKHISV VEQPTGHNSS EADELRASEN
0701: SKGRSGSSKD QQKRLESGEE VLQDRQSRRV NNVRRHHDAE ERNLRRKDEY SRDVKSDLER SHLPSRGRED VHQSYANRDR VDMRGRSYDR VRETEIWPRR
0801: DDGVHNRRAK EEDLRLEYNV EGGARHRNKV RPIDRNDRDE DHSRKRLDDG DWRGSRQRER GDVVLNRRES DDSHIKRNKD DENLRRLKPE NEDMVVAHGY
0901: RARDDNNRRK KERDDGIDQK RRDDSGRLRE KADDRYHAKQ KDDNWRQRER EDRQRPKHEN ALTLQKEEGR GTGRGSRMMD DKLVSGGRKK DEPRSSVLSK
1001: DTQERTRQNE PSRRGQGVEE NNVQNKGRSD VHPRDDNSNI ERNSRQEKQN NNRLSGSSDA RHAGRDRHRD STRKGRGSEL GEHDHRSSKR RREDHESHRS
1101: GKVETKEVNE QESSRGHATL SKKSQNPQPD NSLLNQVEED AISDDENHED SRRGRSKLER WTSHKEIEYS NIDDDSTQTF PTIKADAEAD EVGKSEVSAA
1201: VGNSDINSNV DTGQTSDKMT EERDRHLDTV ERLKRRSERF KLPMPGEKDA PQSKKVDTEV QPPQNESAAV DMEVKPERPA RKRRWTGS
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.