Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55018 | Canola | mitochondrion | 4.37 | 53.64 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 54.78 | 52.75 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 34.77 | 41.39 |
| KXG37677 | Sorghum | nucleus | 39.07 | 40.92 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.48 | 39.83 |
| Zm00001d033843_P007 | Maize | nucleus | 37.51 | 39.81 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 38.03 | 39.61 |
| Zm00001d013380_P001 | Maize | nucleus | 37.21 | 39.34 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 37.21 | 39.31 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 37.66 | 39.2 |
| KRH37905 | Soybean | nucleus | 34.32 | 35.13 |
| KRH12930 | Soybean | nucleus | 33.8 | 34.97 |
| Bra006786.1-P | Field mustard | nucleus | 27.06 | 34.86 |
| CDX88655 | Canola | nucleus | 26.98 | 34.8 |
| CDY43886 | Canola | nucleus | 29.87 | 34.71 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 37.73 | 34.53 |
| Bra002677.1-P | Field mustard | nucleus | 29.73 | 34.22 |
| Solyc07g005320.2.1 | Tomato | nucleus | 32.99 | 32.25 |
| AT5G58040.1 | Thale cress | nucleus | 28.32 | 31.94 |
| CDY11833 | Canola | nucleus | 24.98 | 31.64 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 13.12 | 30.31 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P27630_001 | EnsemblPlants:GSMUA_Achr7T27630_001 | EnsemblPlantsGene:GSMUA_Achr7G27630_001 | InterPro:Fip1 | PANTHER:PTHR36884 | PFAM:PF05182 |
| SEG:seg | UniParc:UPI000294C305 | UniProt:M0TL99 | MapMan:16.2.1.2.6 | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G27630_001]
Coordinates
chr7:-:28581325..28592828
Molecular Weight (calculated)
151964.0 Da
IEP (calculated)
6.108
GRAVY (calculated)
-1.289
Length
1349 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDDDEFGEL YTDVLYPVAT ILKAASRMAT RTGSCSTPLA PTLPSNPHRR PIKPYLRAPP PPPPLKTTVR MIGCSAARLR PSAAPEEPEE DGDRLFVGGV
0101: GENLGDLDQV PLIPGLSAGP APSGPLVGMN SEMGKLSQSE DYDSDSEDDL QIVLNDSNHG PPGAERSNIV EFDEEDDEDG EEDLVIVTDE DQHHHLPAME
0201: VQDWGEETLQ PTGEGERKEM VDAAKGIGAT GTAPGARIGY NNHGIHTQHH SMYKYIRPGA APLPGDPAAG ALGPPGAARP SLVSGPTAGH GRGDWRPASG
0301: RGIPSAPKSY HTNFGFPGWA NGSARASGGG LDFTLPSHKT IFDVDIESFE EKPWKHPGVD ISDFFNFGLD EDKWKDYCKR LASENLDQLR LESTMQSKIR
0401: VYESGRSEQE YDPDLPPELA AAAGHDISAN CGHVKADDEE IKFTGQGRGP AVMRAPLPTG RAIQVEGGYG ERLPSIDTRP PRIRDSDAVI EIVLQDSFDD
0501: PKMYSCTPEQ LERDVEGDCG RSFHKDEKDD RNTVSGYMNR IPHTSSTRDK EMIKRVPFAK EKDELLPLPS DSSAEYRRDS RTRSPVSAVD GASGIHQGGR
0601: LLKGSSSRKR SRAREQSADS IPSRSAHSSR NGDQQKETLL DSTEVNQNSQ TLPAVADDTT RELGVEEQYH DQDEKLALVD SVEIEGDDVT SDFHISSETG
0701: GDDNLIHPGK KQKICSRVEQ PAVQDRGYED ELQPPTSDNS REKSGSSKDC IRQAENGEVI QEGHSSQTGD LKKSQKEDEH NLHAKDEDGL DARQQREKNQ
0801: IVSKGREDAS ISSQNLLRGR SYDRRKESES STSSWQRRES NMHGRRSKDE DIRWENNEEM SRHQSKLRTI DRNQKDEDQS RKHVEGGEWR GHTRDEVLRQ
0901: RERDDLLMSR RENMDNPLIK RKRDEEYLRG KADKVDTSHG HRDREDSGRR KRERDDGLHH KREVDTRMRD KADDHLSSKP KDDSWRHRER DERQRLKPHE
1001: VMHREREEGR VTVRSGRVTE DKPVGGNGRN RDELKPISYD KDYQEKERRR HTELSRRDRA REDNMSQNKG RGDTSVHDKH SNADGRSSRH EKLNTYVDHP
1101: PSADGQQMYR EKHRENTSKA KDVKSHDQNN QRLGKRKHDD RHNSHKNEKV YIKESDEQES NNTSSMTLSK KNSHQIHEQR EATQQHTTVK KQGEDDPVSD
1201: DENQGNRRGR SKLERWTSHK ERDYDAINNS QTLSASSRGK KIEGNAVNVA KEDELVKTEL SNNAGELDVK GADGGQVSVK MVDDQDRHLD TVAKLKRRSE
1301: RFKLPMPREK EITSNKKMEN EVQLSNNEAG LDSEVKPERP ARKRRWTGS
0101: GENLGDLDQV PLIPGLSAGP APSGPLVGMN SEMGKLSQSE DYDSDSEDDL QIVLNDSNHG PPGAERSNIV EFDEEDDEDG EEDLVIVTDE DQHHHLPAME
0201: VQDWGEETLQ PTGEGERKEM VDAAKGIGAT GTAPGARIGY NNHGIHTQHH SMYKYIRPGA APLPGDPAAG ALGPPGAARP SLVSGPTAGH GRGDWRPASG
0301: RGIPSAPKSY HTNFGFPGWA NGSARASGGG LDFTLPSHKT IFDVDIESFE EKPWKHPGVD ISDFFNFGLD EDKWKDYCKR LASENLDQLR LESTMQSKIR
0401: VYESGRSEQE YDPDLPPELA AAAGHDISAN CGHVKADDEE IKFTGQGRGP AVMRAPLPTG RAIQVEGGYG ERLPSIDTRP PRIRDSDAVI EIVLQDSFDD
0501: PKMYSCTPEQ LERDVEGDCG RSFHKDEKDD RNTVSGYMNR IPHTSSTRDK EMIKRVPFAK EKDELLPLPS DSSAEYRRDS RTRSPVSAVD GASGIHQGGR
0601: LLKGSSSRKR SRAREQSADS IPSRSAHSSR NGDQQKETLL DSTEVNQNSQ TLPAVADDTT RELGVEEQYH DQDEKLALVD SVEIEGDDVT SDFHISSETG
0701: GDDNLIHPGK KQKICSRVEQ PAVQDRGYED ELQPPTSDNS REKSGSSKDC IRQAENGEVI QEGHSSQTGD LKKSQKEDEH NLHAKDEDGL DARQQREKNQ
0801: IVSKGREDAS ISSQNLLRGR SYDRRKESES STSSWQRRES NMHGRRSKDE DIRWENNEEM SRHQSKLRTI DRNQKDEDQS RKHVEGGEWR GHTRDEVLRQ
0901: RERDDLLMSR RENMDNPLIK RKRDEEYLRG KADKVDTSHG HRDREDSGRR KRERDDGLHH KREVDTRMRD KADDHLSSKP KDDSWRHRER DERQRLKPHE
1001: VMHREREEGR VTVRSGRVTE DKPVGGNGRN RDELKPISYD KDYQEKERRR HTELSRRDRA REDNMSQNKG RGDTSVHDKH SNADGRSSRH EKLNTYVDHP
1101: PSADGQQMYR EKHRENTSKA KDVKSHDQNN QRLGKRKHDD RHNSHKNEKV YIKESDEQES NNTSSMTLSK KNSHQIHEQR EATQQHTTVK KQGEDDPVSD
1201: DENQGNRRGR SKLERWTSHK ERDYDAINNS QTLSASSRGK KIEGNAVNVA KEDELVKTEL SNNAGELDVK GADGGQVSVK MVDDQDRHLD TVAKLKRRSE
1301: RFKLPMPREK EITSNKKMEN EVQLSNNEAG LDSEVKPERP ARKRRWTGS
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.