Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37677 | Sorghum | nucleus | 83.93 | 83.15 |
| Zm00001d033843_P007 | Maize | nucleus | 78.53 | 78.84 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 54.39 | 61.25 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 59.87 | 59.83 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 60.66 | 59.77 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 60.42 | 59.49 |
| CDY55018 | Canola | mitochondrion | 4.55 | 52.73 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.61 | 38.98 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 39.34 | 37.21 |
| CDY43886 | Canola | nucleus | 31.27 | 34.37 |
| Bra006786.1-P | Field mustard | nucleus | 28.13 | 34.29 |
| CDX88655 | Canola | nucleus | 28.06 | 34.23 |
| Bra002677.1-P | Field mustard | nucleus | 31.27 | 34.04 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 36.83 | 33.55 |
| AT5G58040.1 | Thale cress | nucleus | 30.72 | 32.78 |
| KRH37905 | Soybean | nucleus | 33.7 | 32.63 |
| KRH12930 | Soybean | nucleus | 32.84 | 32.13 |
| CDY11833 | Canola | nucleus | 26.57 | 31.83 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 36.6 | 31.68 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 13.79 | 30.14 |
| Solyc07g005320.2.1 | Tomato | nucleus | 31.74 | 29.35 |
| Zm00001d028902_P003 | Maize | nucleus | 10.97 | 13.2 |
Protein Annotations
| EnsemblPlants:Zm00001d013380_P001 | EnsemblPlants:Zm00001d013380_T001 | EnsemblPlantsGene:Zm00001d013380 | InterPro:Fip1 | PANTHER:PTHR36884 | PFAM:PF05182 |
| ProteinID:AQK63285.1 | SEG:seg | UniParc:UPI0008442CC3 | UniProt:A0A1D6GIJ5 | MapMan:16.2.1.2.6 | : |
Description
FIP1[V]-like protein
Coordinates
chr5:+:10041244..10059831
Molecular Weight (calculated)
142097.0 Da
IEP (calculated)
5.006
GRAVY (calculated)
-1.337
Length
1276 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEDDEFGDL YTDILIPTHT PASTSALSNP VLVETLHRPP PHPNPTPVAA AAEEVDDDWL LGGSEPIPGV DPTGDWADED DDGGEPAPPA KRSTSADDID
0101: PLMGGGAGDS GPVIPGLSSS SAAGAAGSDE WDSDSEDDIQ IVLNETDGRP GLVEDEGDDE DGEDLVIVAD GPAMEEQDWG EDPAAAGAEG ERKDGCEPGK
0201: TVAAPTGRIG YSGGGPGFHQ QHHSMFKYVR PGAPGASVGG VPGGPGQFRP PGPLGPFSGR GRGEWRPAAG RGMNKSFHSG YGITPWGGSG RNFGGGLDFA
0301: LPPHKTIFDI DVETAFEEKP WKFPGADISD FFNFGLDEEK WKDFCKQLDQ LRLESTMQSR IRVYESGRSE QDYDPDLPPE LAAVTGHPDI SADSRNKMVN
0401: GHTDFSAQGR GPANVRTPLM TGRPIQVETN YTDRFPSVDS RSHRMRESDS VIEIVCQGRD SMDDETVDQT EKDSQGGNKG AHCIEGKPYS SDKINNSDHN
0501: SNSVKKTQHK GQLPVSSESD MLSMDANTHS PPSYKTRGSP RGAWPLKGSS LGQNSIREIE SSNEVIPRQS SSKRCHDSQK ENLIEGSENK ADSDSEGSLA
0601: ANDDVADKLS TEDHFDDAGG GGGGDDDKLT LVGRVEMDVD DATSDPNMPS DANHDDNLVH SDTKQKHISV VEQPTEHNSS EPDELRNTEN SKGRSGSSKD
0701: QQKHLESGEE VLQDKQLRRV NNVRMHHDAE EHKLRQKDEH SRDAKSDLER SRLPSRGRED IHQSYANRDR VDIQGRSYNK VRETEILPRR DDGVHSRRAK
0801: EEDLRLEYNV EGGARHRNKV RPIDRNDRDE DHSRKRLDDG DRRGSRQRER GDVVLNRRES DDSLIKRKKD DENLRRLKPE NEDMVATHGY KARDDSNRRK
0901: KERDDGIDQK RRDDSGRLRE KDDDRYHVKQ KDGNWRQRER EDRQRPKQEN TLTVQREEGR GTGRGSRMMD DKLVSGGRKK DEPRSSLLSK DTQERTRQNE
1001: PSRRGQGVEE NNMQNKGRFD DNSNSERNSR QEKQNNNRLS GSSDARHAGR DKHRESTRKG RGSELAEHDL HRSSKRRCED HESHRSGKVE TKEVNEQESS
1101: RGHAALSKKG QNPQPDNSLL NEVEEDAISD DENHEDSRRG RSKLERWTSH KEIEYSNIDD DSTQTFPTIK ADVEADEVGK SQVSAAAGNS DINSNVDTGQ
1201: TSDKMTEECE RDRHLDTVER LKRRSERFKL PMPGEKDAPQ SKKVDTEVQP PQNESSAVDM EVKPERPARK RRWTGS
0101: PLMGGGAGDS GPVIPGLSSS SAAGAAGSDE WDSDSEDDIQ IVLNETDGRP GLVEDEGDDE DGEDLVIVAD GPAMEEQDWG EDPAAAGAEG ERKDGCEPGK
0201: TVAAPTGRIG YSGGGPGFHQ QHHSMFKYVR PGAPGASVGG VPGGPGQFRP PGPLGPFSGR GRGEWRPAAG RGMNKSFHSG YGITPWGGSG RNFGGGLDFA
0301: LPPHKTIFDI DVETAFEEKP WKFPGADISD FFNFGLDEEK WKDFCKQLDQ LRLESTMQSR IRVYESGRSE QDYDPDLPPE LAAVTGHPDI SADSRNKMVN
0401: GHTDFSAQGR GPANVRTPLM TGRPIQVETN YTDRFPSVDS RSHRMRESDS VIEIVCQGRD SMDDETVDQT EKDSQGGNKG AHCIEGKPYS SDKINNSDHN
0501: SNSVKKTQHK GQLPVSSESD MLSMDANTHS PPSYKTRGSP RGAWPLKGSS LGQNSIREIE SSNEVIPRQS SSKRCHDSQK ENLIEGSENK ADSDSEGSLA
0601: ANDDVADKLS TEDHFDDAGG GGGGDDDKLT LVGRVEMDVD DATSDPNMPS DANHDDNLVH SDTKQKHISV VEQPTEHNSS EPDELRNTEN SKGRSGSSKD
0701: QQKHLESGEE VLQDKQLRRV NNVRMHHDAE EHKLRQKDEH SRDAKSDLER SRLPSRGRED IHQSYANRDR VDIQGRSYNK VRETEILPRR DDGVHSRRAK
0801: EEDLRLEYNV EGGARHRNKV RPIDRNDRDE DHSRKRLDDG DRRGSRQRER GDVVLNRRES DDSLIKRKKD DENLRRLKPE NEDMVATHGY KARDDSNRRK
0901: KERDDGIDQK RRDDSGRLRE KDDDRYHVKQ KDGNWRQRER EDRQRPKQEN TLTVQREEGR GTGRGSRMMD DKLVSGGRKK DEPRSSLLSK DTQERTRQNE
1001: PSRRGQGVEE NNMQNKGRFD DNSNSERNSR QEKQNNNRLS GSSDARHAGR DKHRESTRKG RGSELAEHDL HRSSKRRCED HESHRSGKVE TKEVNEQESS
1101: RGHAALSKKG QNPQPDNSLL NEVEEDAISD DENHEDSRRG RSKLERWTSH KEIEYSNIDD DSTQTFPTIK ADVEADEVGK SQVSAAAGNS DINSNVDTGQ
1201: TSDKMTEECE RDRHLDTVER LKRRSERFKL PMPGEKDAPQ SKKVDTEVQP PQNESSAVDM EVKPERPARK RRWTGS
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEGE YVWDERSCVR IGREYA
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEGE YVWDERSCVR IGREYA
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.