Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P27630_001 | Banana | nucleus | 52.75 | 54.78 |
CDY55018 | Canola | mitochondrion | 3.93 | 50.0 |
PGSC0003DMT400008250 | Potato | nucleus | 3.5 | 41.53 |
TraesCS4B01G056200.1 | Wheat | nucleus | 30.69 | 37.95 |
TraesCS4A01G258200.3 | Wheat | nucleus | 34.48 | 37.3 |
Zm00001d033843_P007 | Maize | nucleus | 33.76 | 37.21 |
KXG37677 | Sorghum | nucleus | 34.05 | 37.03 |
Zm00001d013380_P001 | Maize | nucleus | 33.55 | 36.83 |
TraesCS4D01G056600.1 | Wheat | nucleus | 33.98 | 36.73 |
HORVU4Hr1G009390.7 | Barley | nucleus | 33.4 | 36.65 |
KRH12930 | Soybean | nucleus | 32.26 | 34.66 |
KRH37905 | Soybean | nucleus | 31.91 | 33.91 |
VIT_11s0037g00130.t01 | Wine grape | nucleus | 33.9 | 32.23 |
CDX88655 | Canola | nucleus | 24.05 | 32.22 |
Bra006786.1-P | Field mustard | nucleus | 24.05 | 32.19 |
CDY43886 | Canola | nucleus | 26.55 | 32.04 |
Bra002677.1-P | Field mustard | nucleus | 26.27 | 31.4 |
Solyc07g005320.2.1 | Tomato | nucleus | 30.41 | 30.87 |
CDY11833 | Canola | nucleus | 22.91 | 30.14 |
AT5G58040.1 | Thale cress | nucleus | 25.62 | 30.02 |
CDY70580 | Canola | cytosol, nucleus, plastid | 10.99 | 26.37 |
Protein Annotations
EnsemblPlants:GSMUA_Achr4P14570_001 | EnsemblPlants:GSMUA_Achr4T14570_001 | EnsemblPlantsGene:GSMUA_Achr4G14570_001 | InterPro:Fip1 | PFAM:PF05182 | SEG:seg |
UniParc:UPI00029614FA | UniProt:M0SNX2 | MapMan:16.2.1.2.6 | : | : | : |
Description
Putative fip1 motif family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G14570_001]
Coordinates
chr4:+:10894987..10905596
Molecular Weight (calculated)
157827.0 Da
IEP (calculated)
5.663
GRAVY (calculated)
-1.205
Length
1401 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDDDEFGEL YTDVFRPIAD SPPAPSPGTR PDPVVPAADD DIEGGDGDEI LFGASRSSPA AELPSRDWML GHAPPVVEAP ENWDDENDGR LRAPNGDGYP
0101: LFGGGVVENL GDPDEAPVIP GLSAEPAPSG PLIGMNIEER KPSQSEDWDS DSEDDLQIVL NDSDHGRLGV DRNDRIGIDD DDREDDLVIV TDEDQHRHVP
0201: ATDEQNCGEE AMQSTGDGER KEMVDVAKIA SATGSALEAR IGYNTHGSHP QHHSIVVYFH SVFVQSLQTL MPMSLSVVIS LMGRLSLWHH NSLANFGLFL
0301: MQYIRPGAAP LPGGPAAGTA CPPGAARPPL ISGPLSGGGR GDWRPAGGRG IPNGPKGYTG FGFPAWANSS SRAFGSGLDF TLPAHKSVFD VDIESFEEKP
0401: WRHPGVDVSD FFNFGFDEDK WKDYCKQLAS ESLDQLRLES TMQSKIHVYE SGRSEQEYDP DLPPELATAA GHHNIFANNG HKKADDGEVD FSNQGRGSSV
0501: MRAPLPTGRA IQVEGGYGER LPSIDTRPPR IRDADAVIEV TFNDIYFHMF IVLQDSFDDP KMCNCAPEKH KSVERDDDKC FHEVKNDDRN TVSGNMRHFS
0601: HASGNRNKEM TRRALSAKEK NEVLLFPSES SAEYHQDSRT RSPVSPAKAL GIHQSCRLPQ GSSHRRSSNG REQSIDGIPS PSVHSNRLGD EEETQDDSTG
0701: VDRSSGKSSS VADDTVKELS VDEQCCGHDE KLTPVSIENE GEDMVSDVHI PNETSDNDKL VQTGKKQKLS SLVEQPAGHD SGHEDELQTS NSDNSRQKSG
0801: SSKDYPKQTE NGDKVIQEEH SIQVGHLKRP HKEECYLRPK DDYGLDARQV MKKDYIVSKG KDDTSDSYKH PLRSRSYERK KESESSISSW QRREDNVHSR
0901: RVKDEDRRWE NSDEMVSKHR SKLRVTDRNP KEEDHSKKRV EDRDWRGHNR DDVLWQRSRD DLVSRHESTD EPLIKKKRDE EYLRGKADKL STLHGYRDEE
1001: NSGRKKRARD DAIDHRRREV DTRMRDKADD HLSSNHKDDN WRYREREDRQ RLKPHESAPM HREREEGRGS VRSGRAMEDK ASGGSARNRD ESKTIVHDSR
1101: VHQEKERRQL NDHSKRDHGR EDDVQNKGRR HLSVREKYSN NDRRNSRHER MNTYKDCPPS ADGKQMYRER HKENTRKSKD SEAHEQHSQG LGKRKHEDRH
1201: TAQTDKVYIR SLNEQESNNI SSTDLSKDPH QIYEEPEAPQ QKKQEEADPA SDEENQGSRK GRSKLERWTS HKERDYDATG NTHTLSASSG VKKIEGDNVD
1301: VVQADEGAKT EFNNAGELDG KDVDGGQIVD KTVDEPDHHL DTMAKLKRRS ERFKLPMPIV KETTLSKKLE NEVQSSNNEA ALDSEVKPER PARKRRWTGS
1401: S
0101: LFGGGVVENL GDPDEAPVIP GLSAEPAPSG PLIGMNIEER KPSQSEDWDS DSEDDLQIVL NDSDHGRLGV DRNDRIGIDD DDREDDLVIV TDEDQHRHVP
0201: ATDEQNCGEE AMQSTGDGER KEMVDVAKIA SATGSALEAR IGYNTHGSHP QHHSIVVYFH SVFVQSLQTL MPMSLSVVIS LMGRLSLWHH NSLANFGLFL
0301: MQYIRPGAAP LPGGPAAGTA CPPGAARPPL ISGPLSGGGR GDWRPAGGRG IPNGPKGYTG FGFPAWANSS SRAFGSGLDF TLPAHKSVFD VDIESFEEKP
0401: WRHPGVDVSD FFNFGFDEDK WKDYCKQLAS ESLDQLRLES TMQSKIHVYE SGRSEQEYDP DLPPELATAA GHHNIFANNG HKKADDGEVD FSNQGRGSSV
0501: MRAPLPTGRA IQVEGGYGER LPSIDTRPPR IRDADAVIEV TFNDIYFHMF IVLQDSFDDP KMCNCAPEKH KSVERDDDKC FHEVKNDDRN TVSGNMRHFS
0601: HASGNRNKEM TRRALSAKEK NEVLLFPSES SAEYHQDSRT RSPVSPAKAL GIHQSCRLPQ GSSHRRSSNG REQSIDGIPS PSVHSNRLGD EEETQDDSTG
0701: VDRSSGKSSS VADDTVKELS VDEQCCGHDE KLTPVSIENE GEDMVSDVHI PNETSDNDKL VQTGKKQKLS SLVEQPAGHD SGHEDELQTS NSDNSRQKSG
0801: SSKDYPKQTE NGDKVIQEEH SIQVGHLKRP HKEECYLRPK DDYGLDARQV MKKDYIVSKG KDDTSDSYKH PLRSRSYERK KESESSISSW QRREDNVHSR
0901: RVKDEDRRWE NSDEMVSKHR SKLRVTDRNP KEEDHSKKRV EDRDWRGHNR DDVLWQRSRD DLVSRHESTD EPLIKKKRDE EYLRGKADKL STLHGYRDEE
1001: NSGRKKRARD DAIDHRRREV DTRMRDKADD HLSSNHKDDN WRYREREDRQ RLKPHESAPM HREREEGRGS VRSGRAMEDK ASGGSARNRD ESKTIVHDSR
1101: VHQEKERRQL NDHSKRDHGR EDDVQNKGRR HLSVREKYSN NDRRNSRHER MNTYKDCPPS ADGKQMYRER HKENTRKSKD SEAHEQHSQG LGKRKHEDRH
1201: TAQTDKVYIR SLNEQESNNI SSTDLSKDPH QIYEEPEAPQ QKKQEEADPA SDEENQGSRK GRSKLERWTS HKERDYDATG NTHTLSASSG VKKIEGDNVD
1301: VVQADEGAKT EFNNAGELDG KDVDGGQIVD KTVDEPDHHL DTMAKLKRRS ERFKLPMPIV KETTLSKKLE NEVQSSNNEA ALDSEVKPER PARKRRWTGS
1401: S
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.