Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12930 | Soybean | nucleus | 88.47 | 89.42 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 52.66 | 47.08 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.64 | 40.68 |
| CDY43886 | Canola | nucleus | 35.74 | 40.57 |
| Bra002677.1-P | Field mustard | nucleus | 36.04 | 40.53 |
| CDX88655 | Canola | nucleus | 32.02 | 40.34 |
| Bra006786.1-P | Field mustard | nucleus | 32.02 | 40.31 |
| Solyc07g005320.2.1 | Tomato | nucleus | 41.58 | 39.71 |
| AT5G58040.1 | Thale cress | nucleus | 35.89 | 39.55 |
| CDY11833 | Canola | nucleus | 30.96 | 38.31 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 16.39 | 36.99 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 30.35 | 35.3 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 34.22 | 34.83 |
| KXG37677 | Sorghum | nucleus | 33.61 | 34.39 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 35.13 | 34.32 |
| Zm00001d033843_P007 | Maize | nucleus | 32.93 | 34.15 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 33.54 | 34.1 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 32.7 | 33.75 |
| Zm00001d013380_P001 | Maize | nucleus | 32.63 | 33.7 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 33.91 | 31.91 |
| KRH11949 | Soybean | nucleus | 14.04 | 16.85 |
| KRH36974 | Soybean | nucleus | 13.51 | 16.23 |
Protein Annotations
| EMBL:ACUP02005551 | EnsemblPlants:KRH37905 | EnsemblPlantsGene:GLYMA_09G097600 | EntrezGene:100803769 | InterPro:Fip1 | ncoils:Coil |
| PANTHER:PTHR36884 | PFAM:PF05182 | ProteinID:KRH37905 | ProteinID:KRH37905.1 | SEG:seg | UniParc:UPI0002956410 |
| UniProt:K7LCU5 | MapMan:16.2.1.2.6 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:15778826..15787896
Molecular Weight (calculated)
148792.0 Da
IEP (calculated)
4.834
GRAVY (calculated)
-1.314
Length
1318 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDDDEFGDL YTDVLRPFAS SSPSSSSAQQ LHQLSPAPPS LDLNLNPNPD AAQIPCDAPH TYSPAPTNPL PEPDPREPPP ESPKIPDAEP LPDSNLVAAV
0101: VAGVDPMDRE VKFDIEEDDD DGGCGGDVVG ETVIPGLSGE AAAAVPPEGE GDDWDSDSED DLKIVLNENN HMAMERGGVA DGDEEEEDGD EELVIVAGGD
0201: LNQGVEEPEW GENAALAAGD GDRKDAAGEL AKVGGAAVPP KIGYSNHGYH PFHSPFKYQY VRPGAALMPG AAASAPGGPP GQIRPLANMA GRGRGEWRPP
0301: GIKGGAAMQK GFHAGPGLPG WGSSAAGRGF GGGLEFTLPS HKTIFDVEIE NFEEKPWKYP NVDISDFFNF GLNEESWKDY CKQLEQLRLE STMQSKIRVY
0401: ESGRTEQEYD PDLPPELAAA TGIHDVPGEH TNSLKSDVGQ SDVMKGSGTG RVRPPLPTGR AIQVEGGYGD RLPSIDTRPP RIRDSDAIIE IVLQDTEDDE
0501: SSAGIAQDPP ESGDPHREDF REDHVAGDEI PRLEPKYFDG FPQDYNGRKK EIAGRRMPFI NSCAANMPNG DEKLFFPQEE PIEYSGSRGQ NRRNYGGNFS
0601: SSHDERQMQR RVRGQSPPII PIQELATDNS QKEESAESME GRHRSSPAVK DVGESSVEYK DIELEDTETA DGSSRLEKEE TVDRVDTLED GVAKRQKVTS
0701: QVEPPLPDEV DDDWEDSKAA KSSDNSKARS ASSRDNQKRQ EGFEEEVVQD PQSAHLGSIR QHPDEIEPGF YKREHDAKQE PERNRMMLKG RERSYPYKDR
0801: HPSSAPQLHA NTDGFDGQKE RDNSEMDWAR RDDDLYNRRV RNDEPRKRDR AKVRENERND KEDSLHSRKQ LDNGSYRVLY EKDVGSRDSR HRERDEGLRI
0901: RYEAVEDYRG KRRKDEEYLR REHIDKEEVL HGYRENASRR RRERDEVLDP RKRDDLQRAR DNPDDQYATR QKDDAWVPRE RGDRQRDREE WHRMKQSHEE
1001: HLPKREREEG RSSVRSGRGA EHKLSEKEYQ SREAMRQNDQ LKRRDRIQDE SPHHKGRDDA SARGNQYTTE ERRSRQERSS SRSDRVANFS DNQKVKHREG
1101: SRKSKERDVS DLNSLGLSKR SQENQIGPTN EKGLKGSGDE ERAEHEIPGH RLSRKQREDM SSDDEQQDSR RGRSKLERWT SHKERDFSVN KSSSSLKYKD
1201: IDKDNNDGSS EAGKPADEPA KTVDVDNQHL LLAEARDSAD MENRDADTKE LGDRHLDTVE RLKKRSERFK LPMPSEKETL VIKKLESEPL PSAKSENPVV
1301: DSEVKQERPA RKRRWVTN
0101: VAGVDPMDRE VKFDIEEDDD DGGCGGDVVG ETVIPGLSGE AAAAVPPEGE GDDWDSDSED DLKIVLNENN HMAMERGGVA DGDEEEEDGD EELVIVAGGD
0201: LNQGVEEPEW GENAALAAGD GDRKDAAGEL AKVGGAAVPP KIGYSNHGYH PFHSPFKYQY VRPGAALMPG AAASAPGGPP GQIRPLANMA GRGRGEWRPP
0301: GIKGGAAMQK GFHAGPGLPG WGSSAAGRGF GGGLEFTLPS HKTIFDVEIE NFEEKPWKYP NVDISDFFNF GLNEESWKDY CKQLEQLRLE STMQSKIRVY
0401: ESGRTEQEYD PDLPPELAAA TGIHDVPGEH TNSLKSDVGQ SDVMKGSGTG RVRPPLPTGR AIQVEGGYGD RLPSIDTRPP RIRDSDAIIE IVLQDTEDDE
0501: SSAGIAQDPP ESGDPHREDF REDHVAGDEI PRLEPKYFDG FPQDYNGRKK EIAGRRMPFI NSCAANMPNG DEKLFFPQEE PIEYSGSRGQ NRRNYGGNFS
0601: SSHDERQMQR RVRGQSPPII PIQELATDNS QKEESAESME GRHRSSPAVK DVGESSVEYK DIELEDTETA DGSSRLEKEE TVDRVDTLED GVAKRQKVTS
0701: QVEPPLPDEV DDDWEDSKAA KSSDNSKARS ASSRDNQKRQ EGFEEEVVQD PQSAHLGSIR QHPDEIEPGF YKREHDAKQE PERNRMMLKG RERSYPYKDR
0801: HPSSAPQLHA NTDGFDGQKE RDNSEMDWAR RDDDLYNRRV RNDEPRKRDR AKVRENERND KEDSLHSRKQ LDNGSYRVLY EKDVGSRDSR HRERDEGLRI
0901: RYEAVEDYRG KRRKDEEYLR REHIDKEEVL HGYRENASRR RRERDEVLDP RKRDDLQRAR DNPDDQYATR QKDDAWVPRE RGDRQRDREE WHRMKQSHEE
1001: HLPKREREEG RSSVRSGRGA EHKLSEKEYQ SREAMRQNDQ LKRRDRIQDE SPHHKGRDDA SARGNQYTTE ERRSRQERSS SRSDRVANFS DNQKVKHREG
1101: SRKSKERDVS DLNSLGLSKR SQENQIGPTN EKGLKGSGDE ERAEHEIPGH RLSRKQREDM SSDDEQQDSR RGRSKLERWT SHKERDFSVN KSSSSLKYKD
1201: IDKDNNDGSS EAGKPADEPA KTVDVDNQHL LLAEARDSAD MENRDADTKE LGDRHLDTVE RLKKRSERFK LPMPSEKETL VIKKLESEPL PSAKSENPVV
1301: DSEVKQERPA RKRRWVTN
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.