Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37905 | Soybean | nucleus | 47.08 | 52.66 |
| KRH12930 | Soybean | nucleus | 45.66 | 51.61 |
| Bra006786.1-P | Field mustard | nucleus | 31.61 | 44.51 |
| CDX88655 | Canola | nucleus | 31.48 | 44.36 |
| Solyc07g005320.2.1 | Tomato | nucleus | 40.84 | 43.62 |
| CDY43886 | Canola | nucleus | 34.19 | 43.41 |
| Bra002677.1-P | Field mustard | nucleus | 34.33 | 43.17 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 16.89 | 42.64 |
| AT5G58040.1 | Thale cress | nucleus | 34.46 | 42.47 |
| CDY11833 | Canola | nucleus | 29.92 | 41.41 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.19 | 39.83 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 29.17 | 37.95 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 34.53 | 37.73 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 32.84 | 37.37 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 32.36 | 36.81 |
| KXG37677 | Sorghum | nucleus | 32.09 | 36.72 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 31.75 | 36.65 |
| Zm00001d013380_P001 | Maize | nucleus | 31.68 | 36.6 |
| Zm00001d033843_P007 | Maize | nucleus | 31.41 | 36.43 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 32.23 | 33.9 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 12.96 | 14.69 |
Protein Annotations
| EntrezGene:100251960 | MapMan:16.2.1.2.6 | ProteinID:CCB59753 | ProteinID:CCB59753.1 | UniProt:F6HYI9 | EMBL:FN596499 |
| InterPro:Fip1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042802 | GO:GO:0043565 | PFAM:PF05182 | TIGR:TC53894 | UniParc:UPI00019844CB | ArrayExpress:VIT_11s0037g00130 |
| EnsemblPlantsGene:VIT_11s0037g00130 | EnsemblPlants:VIT_11s0037g00130.t01 | unigene:Vvi.2098 | RefSeq:XP_010656604.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr11:+:7809596..7833836
Molecular Weight (calculated)
164849.0 Da
IEP (calculated)
5.183
GRAVY (calculated)
-1.255
Length
1474 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDDDEFGDL YTDVLRPFSS SSAPQPHQSS SNPASFNPSI DLNTHSDDED FLYVAPKSNS TISHKPINQT LVPEPQKPPP ELGTAQSRDS GQNFGGGDVL
0101: VEQGLGKGGD FVGGSKNCAA DSLELGGSRV LESGDVKLPD GASEDDKSGV DAGRGRDVDF MEKDVNFDIE EVDGEAGDVG LDPIIPGLSA APAIPSLDAP
0201: VEPQNREKTN VVARDDASVQ GDDWDSDSED DLQIVLNDNN HGPMAAERNG VMGSDDEDED GDPLVIVADG DQTHPPLEEQ EWGEDTAVDG ERKEGADAAK
0301: VNGAIAGPPK IGYSSHGYHP FHSQFKYVRP GAAPIPGAAA VVPGGTPGQV RPLANIGPVP GRGRGDWRPA GIKNAPPMQK NFHSGFGAPA WGGNMAGRGF
0401: GGGLEFTLPS HKTIFDVDID SFEEKPWRHP GVDISDFFNF GFNEESWKQY CKQLEQLRLE ATMQTKIRVY ESGRTEQEYD PDLPPELAAA VGIHDVSAEN
0501: GNLGRADVGP SDLAKASARV RPPIPTGRAI QVEGGCGERL PSVDTRPPRV RDSDAIIEIT LQGSLDDDSP TGNGAPEPPD NDLPREDLRV GNEVEDDAAQ
0601: EDTEYFDSFS TTYSGRNREL VGRSAPFMNS LRDDMPGGDG ILPFPPEAPV QYRPGSRGQD PVHPGGNFGT PHEDRRIRGR AHGKSPHMTP IQSTRDNRFL
0701: DSQKEESVES MDVKGMTSSP VRVAPPREPS VEKKDAVHDE IELADGMERE ELTSDIIVTT DTSKVGNSVQ SGKKQKLSSR VEQPPPQELD GGIVLADGTS
0801: GMEREELTSN TMTSTDALKD ENLIPFGKKQ KLSSRVEQPP PQELDGDEDL KATRSSENSK ARSESSRDLQ KWHDGGEEEV IEDGSSVRMG NSKRHLDEDE
0901: QSFRRKDRDG RQEMERSRMV VKGREDTYPH RDWDSIPNHH SHVKTDSFDR RKERDSSDGG WQRRDDDLHG RRIRPEDARK QERGDEMGSR HRSKVRESER
1001: SNKDELLHSR KLLDNGSWRG HQDKDMGSRH RERDDNLKSR YGNLDDLHGK RRKDEEYLRR DHAEKEETLH SHRESASRRK RERDDVLDQR KRDDQPRIRD
1101: NLDDHHSVRH KDEGWMQRER GERQREREEW HRLRQPHEEN LSKREREEGR GAVRSGRGAE DKAWVSHARG KDEYKGSDKD YQYKDTGRHS EQPKRRDRVE
1201: DESFSHHRGR EDVYARGSQF SNEERRSRQE RSSARNDHSS NASDHQRVHD KKHKENTRKN KESEGADIST LGPSKRNQED HNSQRNETVI SKGTSEQGNG
1301: EHEILVHRQS RKHREDASSD DEQQDSKRGR SKLERWTSHK ERDYNLNIKP SSSIKVKEIE RNNSGGSPLT GKFPDESAKT VEAVDSQQHV EEKDAGDLEL
1401: KDADMKPMED RHLDTVAKLK KRSERFKLPM PSEKEAVAVK KVGSEALPPA PTETPADSEI KQERPARKRR WVGN
0101: VEQGLGKGGD FVGGSKNCAA DSLELGGSRV LESGDVKLPD GASEDDKSGV DAGRGRDVDF MEKDVNFDIE EVDGEAGDVG LDPIIPGLSA APAIPSLDAP
0201: VEPQNREKTN VVARDDASVQ GDDWDSDSED DLQIVLNDNN HGPMAAERNG VMGSDDEDED GDPLVIVADG DQTHPPLEEQ EWGEDTAVDG ERKEGADAAK
0301: VNGAIAGPPK IGYSSHGYHP FHSQFKYVRP GAAPIPGAAA VVPGGTPGQV RPLANIGPVP GRGRGDWRPA GIKNAPPMQK NFHSGFGAPA WGGNMAGRGF
0401: GGGLEFTLPS HKTIFDVDID SFEEKPWRHP GVDISDFFNF GFNEESWKQY CKQLEQLRLE ATMQTKIRVY ESGRTEQEYD PDLPPELAAA VGIHDVSAEN
0501: GNLGRADVGP SDLAKASARV RPPIPTGRAI QVEGGCGERL PSVDTRPPRV RDSDAIIEIT LQGSLDDDSP TGNGAPEPPD NDLPREDLRV GNEVEDDAAQ
0601: EDTEYFDSFS TTYSGRNREL VGRSAPFMNS LRDDMPGGDG ILPFPPEAPV QYRPGSRGQD PVHPGGNFGT PHEDRRIRGR AHGKSPHMTP IQSTRDNRFL
0701: DSQKEESVES MDVKGMTSSP VRVAPPREPS VEKKDAVHDE IELADGMERE ELTSDIIVTT DTSKVGNSVQ SGKKQKLSSR VEQPPPQELD GGIVLADGTS
0801: GMEREELTSN TMTSTDALKD ENLIPFGKKQ KLSSRVEQPP PQELDGDEDL KATRSSENSK ARSESSRDLQ KWHDGGEEEV IEDGSSVRMG NSKRHLDEDE
0901: QSFRRKDRDG RQEMERSRMV VKGREDTYPH RDWDSIPNHH SHVKTDSFDR RKERDSSDGG WQRRDDDLHG RRIRPEDARK QERGDEMGSR HRSKVRESER
1001: SNKDELLHSR KLLDNGSWRG HQDKDMGSRH RERDDNLKSR YGNLDDLHGK RRKDEEYLRR DHAEKEETLH SHRESASRRK RERDDVLDQR KRDDQPRIRD
1101: NLDDHHSVRH KDEGWMQRER GERQREREEW HRLRQPHEEN LSKREREEGR GAVRSGRGAE DKAWVSHARG KDEYKGSDKD YQYKDTGRHS EQPKRRDRVE
1201: DESFSHHRGR EDVYARGSQF SNEERRSRQE RSSARNDHSS NASDHQRVHD KKHKENTRKN KESEGADIST LGPSKRNQED HNSQRNETVI SKGTSEQGNG
1301: EHEILVHRQS RKHREDASSD DEQQDSKRGR SKLERWTSHK ERDYNLNIKP SSSIKVKEIE RNNSGGSPLT GKFPDESAKT VEAVDSQQHV EEKDAGDLEL
1401: KDADMKPMED RHLDTVAKLK KRSERFKLPM PSEKEAVAVK KVGSEALPPA PTETPADSEI KQERPARKRR WVGN
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.