Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G258200.3 | Wheat | nucleus | 97.45 | 97.53 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 83.26 | 95.23 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 89.66 | 90.99 |
| KXG37677 | Sorghum | nucleus | 63.35 | 63.74 |
| Zm00001d033843_P007 | Maize | nucleus | 61.11 | 62.31 |
| Zm00001d013380_P001 | Maize | nucleus | 59.49 | 60.42 |
| CDY55018 | Canola | mitochondrion | 4.17 | 49.09 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.78 | 41.53 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 39.2 | 37.66 |
| CDY43886 | Canola | nucleus | 30.63 | 34.19 |
| CDX88655 | Canola | nucleus | 27.47 | 34.03 |
| Bra006786.1-P | Field mustard | nucleus | 27.47 | 34.0 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 36.73 | 33.98 |
| KRH37905 | Soybean | nucleus | 34.1 | 33.54 |
| Bra002677.1-P | Field mustard | nucleus | 30.17 | 33.36 |
| KRH12930 | Soybean | nucleus | 33.1 | 32.9 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 36.81 | 32.36 |
| AT5G58040.1 | Thale cress | nucleus | 29.55 | 32.02 |
| CDY11833 | Canola | nucleus | 25.93 | 31.55 |
| Solyc07g005320.2.1 | Tomato | nucleus | 32.48 | 30.51 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 13.19 | 29.28 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 11.73 | 14.5 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G056600.1 | EnsemblPlantsGene:TraesCS4D01G056600 | InterPro:Fip1 | PANTHER:PTHR36884 | PFAM:PF05182 | SEG:seg |
| MapMan:16.2.1.2.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:31804759..31814959
Molecular Weight (calculated)
143042.0 Da
IEP (calculated)
5.147
GRAVY (calculated)
-1.362
Length
1296 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDDDEFGDL YTDIVLPTSE PPRPPPPAET PPRAAPAPNP NSAPAPASAA AAAGDEEEDD DDWLLGGGDP LAGVDPTTDW VDEDDDGGAP PAVKREVDAK
0101: PPAPAAEDPD PLMGVGADDP GAAIPGLSSS AAAGGAAGSD DWDSDSEDDL QIVLNETDGR RRLGEDEGDD EDGEDLLIVA DGPHIPGMEE QEWVEDGTAA
0201: GPEGERKEGG EPGKTGPMPG GRIGYSGGGP GFHPQHHSMF KYVRPGAPTG GAPSAPGQFR PPGPPGPFSG RGRGDWRPGA GRGMNKGFHS GYGMTPWGGS
0301: GRGFGGGLDF TLPPHKIIFD IDIDTTFEEK PWKYPGAEIS DFFNFGLDEE XXXXXXXHQD QSRLESTMQS RIRVYESGRS EQDYDPDLPP ELAAAAGHHD
0401: VSADNRNKVD NGHTDFSAQG RVPTSNRPAV MTGRPIQVET GYGERFPSAD TRTARNRESD SVVIEIVCEP PADDPVVADS SVDQSEKDSQ GGKKSNGVEE
0501: SEVYTPEKTN NSSYNSSLGK AEHTRRLPVS SEGDMLTSDV QVRSPPNYKI RGSPSRGVRL KGRSQGVNPS REAESSNEVP RKTTSSKRRR DTPRDSKPVD
0601: DSETKDGLKR SPTVADETTD KLSTEDQFAD NDDRLALVDS AEVDADDAIS EPHMASDTNE DDNEDHSSKR QKIISKVEQP PGLINSSDQV DLKTLNSENS
0701: RGVRSGSSKD HQKRLESGEE VLQDRRSRRV NDVRRHHDGE ERDPRRKDVS ARDVKPEIER THLASRGRDD IHHPYGNRDR DIRGKSFDRV RETEILQRRE
0801: DSMHNRRGKE EDLRLNYNAE VGARHRNKLR PIDRNDRDED PHPRKLLDDG DWRGSRQRER GDMVLNSRES LDDSHIKRKK DEENTRRMKP ENEDAVHGYR
0901: GRDDPNRRKR ERDDGIDQKR RDDGVRMREK ADDRSIVKNK EDSLRQREKD DRQRPKHEST LLLQREEGRG TGRGGRVMDD KIVGGGRKKD ESRSALLSKE
1001: TLERNKQNEP GRRGQGAEEN STQNKGRADV RPRDDNPNNN ERNSRQDKIN KIHDNNRVSS SSDARQASRD KPRESTRKGR GSVPNEQDLH RSSKRRREDH
1101: ESHRSGKVEA KGGREQQNGR DHATSSKTSK NPQQHDSFVK QGEEEAMSDD ENTDDSRRGR SKLERWTSHK EIDYSTIDNE TTHAFPSIKA DVQLPTADAS
1201: GKSDVPAIVV SSDMKNSGDN GQASEMTAEE RDRHLDTVER LKRRSERFKL PMPGEKEVPQ NKKVDAEVQT PQNELPAADV EVKPERPARK RRWAGS
0101: PPAPAAEDPD PLMGVGADDP GAAIPGLSSS AAAGGAAGSD DWDSDSEDDL QIVLNETDGR RRLGEDEGDD EDGEDLLIVA DGPHIPGMEE QEWVEDGTAA
0201: GPEGERKEGG EPGKTGPMPG GRIGYSGGGP GFHPQHHSMF KYVRPGAPTG GAPSAPGQFR PPGPPGPFSG RGRGDWRPGA GRGMNKGFHS GYGMTPWGGS
0301: GRGFGGGLDF TLPPHKIIFD IDIDTTFEEK PWKYPGAEIS DFFNFGLDEE XXXXXXXHQD QSRLESTMQS RIRVYESGRS EQDYDPDLPP ELAAAAGHHD
0401: VSADNRNKVD NGHTDFSAQG RVPTSNRPAV MTGRPIQVET GYGERFPSAD TRTARNRESD SVVIEIVCEP PADDPVVADS SVDQSEKDSQ GGKKSNGVEE
0501: SEVYTPEKTN NSSYNSSLGK AEHTRRLPVS SEGDMLTSDV QVRSPPNYKI RGSPSRGVRL KGRSQGVNPS REAESSNEVP RKTTSSKRRR DTPRDSKPVD
0601: DSETKDGLKR SPTVADETTD KLSTEDQFAD NDDRLALVDS AEVDADDAIS EPHMASDTNE DDNEDHSSKR QKIISKVEQP PGLINSSDQV DLKTLNSENS
0701: RGVRSGSSKD HQKRLESGEE VLQDRRSRRV NDVRRHHDGE ERDPRRKDVS ARDVKPEIER THLASRGRDD IHHPYGNRDR DIRGKSFDRV RETEILQRRE
0801: DSMHNRRGKE EDLRLNYNAE VGARHRNKLR PIDRNDRDED PHPRKLLDDG DWRGSRQRER GDMVLNSRES LDDSHIKRKK DEENTRRMKP ENEDAVHGYR
0901: GRDDPNRRKR ERDDGIDQKR RDDGVRMREK ADDRSIVKNK EDSLRQREKD DRQRPKHEST LLLQREEGRG TGRGGRVMDD KIVGGGRKKD ESRSALLSKE
1001: TLERNKQNEP GRRGQGAEEN STQNKGRADV RPRDDNPNNN ERNSRQDKIN KIHDNNRVSS SSDARQASRD KPRESTRKGR GSVPNEQDLH RSSKRRREDH
1101: ESHRSGKVEA KGGREQQNGR DHATSSKTSK NPQQHDSFVK QGEEEAMSDD ENTDDSRRGR SKLERWTSHK EIDYSTIDNE TTHAFPSIKA DVQLPTADAS
1201: GKSDVPAIVV SSDMKNSGDN GQASEMTAEE RDRHLDTVER LKRRSERFKL PMPGEKEVPQ NKKVDAEVQT PQNELPAADV EVKPERPARK RRWAGS
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.