Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
PPI

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G328600.1 Wheat cytosol, nucleus, peroxisome 94.34 94.34
TraesCS7B01G229300.1 Wheat cytosol 96.23 83.27
HORVU7Hr1G078670.4 Barley plastid 87.74 72.09
Os08t0398800-02 Rice cytosol 74.06 69.47
Zm00001d050266_P001 Maize cytosol 69.81 66.07
OQU80396 Sorghum cytosol 72.64 64.71
GSMUA_Achr3P26260_001 Banana cytosol 60.85 60.0
Bra011138.1-P Field mustard cytosol 56.13 54.34
CDY43528 Canola cytosol 55.19 53.92
PGSC0003DMT400046377 Potato cytosol 50.94 53.47
AT4G29820.1 Thale cress cytosol 55.19 52.7
Solyc07g041000.2.1 Tomato cytosol 49.06 51.49
TraesCS1D01G355400.1 Wheat cytosol 45.75 47.78
TraesCS2D01G592500.2 Wheat cytosol 44.34 46.31
KRH37445 Soybean nucleus 47.64 44.89
CDX88087 Canola cytosol, extracellular, mitochondrion, plastid 11.32 43.64
CDX68589 Canola plastid 55.66 41.55
VIT_11s0016g01760.t01 Wine grape plastid 53.77 39.18
CDX88086 Canola cytosol, mitochondrion, peroxisome 8.96 38.78
Bra009744.1-P Field mustard cytosol, mitochondrion, peroxisome 8.96 38.78
CDX85073 Canola cytosol, extracellular, nucleus 36.79 36.62
KRH12461 Soybean plastid 46.7 33.45
Protein Annotations
MapMan:16.2.1.4.1Gene3D:3.90.79.10InterPro:Cleav_polyA_spec_factor_su5GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003729GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005654GO:GO:0005849GO:GO:0006139GO:GO:0006378GO:GO:0008150GO:GO:0008152
GO:GO:0009987PFAM:PF13869PIRSF:PIRSF017888PANTHER:PTHR13047PANTHER:PTHR13047:SF1EnsemblPlantsGene:TraesCS7D01G325500
EnsemblPlants:TraesCS7D01G325500.1:::::
Description
No Description!
Coordinates
chr7D:-:415957997..415959192
Molecular Weight (calculated)
23897.1 Da
IEP (calculated)
9.772
GRAVY (calculated)
-0.252
Length
212 amino acids
Sequence
(BLAST)
001: MGLEMAPVEE ERSPEQPELQ IYPLCRYYFG ARDARPCAGE TAADRALRLK ANFAARGLRT CVHGVLLVEL SGHPHVLLLQ VRNSSFLLPG GRLRPAEQDV
101: QGLKRKLSSK LAAADRNGDH HWQIGECIGM WWRSEFEARP FPYPPPNTRA PKECVKLFLV RLPMARQFVV PRNLKLLAVP LSQIHDNPQV YGPIISGVPN
201: LLSKFSFNLV RD
Best Arabidopsis Sequence Match ( AT4G29820.1 )
(BLAST)
001: MGEEARALDM EEISDNTTRR NDVVHDLMVD LYPLSSYYFG SKEALRVKDE IISDRVIRLK SNYAAHGLRT CVEAVLLVEL FKHPHVLLLQ YRNSIFKLPG
101: GRLRPGESDI EGLKRKLASK LSVNENVGVS GYEVGECIGM WWRPNFETLM YPFLPPNIKH PKECTKLFLV RLPVHQQFVV PKNFKLLAVP LCQLHENEKT
201: YGPIMSQIPK LLSKFSFNMM EI
Arabidopsis Description
CFIS1Pre-mRNA cleavage factor Im 25 kDa subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AF0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.