Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G182200.1 | Wheat | nucleus | 92.46 | 92.46 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 90.08 | 89.82 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 71.76 | 80.6 |
| Os03t0308900-01 | Rice | nucleus | 27.58 | 58.98 |
| KXG39524 | Sorghum | cytosol | 6.49 | 48.23 |
| Zm00001d028902_P003 | Maize | nucleus | 42.84 | 42.32 |
| KRH36974 | Soybean | nucleus | 16.13 | 15.41 |
| KRH11949 | Soybean | nucleus | 16.13 | 15.39 |
| AT3G66652.3 | Thale cress | nucleus | 12.88 | 13.54 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 16.79 | 13.54 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 14.5 | 11.73 |
| CDY57616 | Canola | nucleus | 10.97 | 11.39 |
| PGSC0003DMT400011772 | Potato | nucleus | 12.02 | 11.15 |
| Solyc12g099280.1.1 | Tomato | nucleus | 12.02 | 11.15 |
| CDY57615 | Canola | plastid | 2.48 | 11.02 |
| CDX74095 | Canola | nucleus | 11.74 | 9.7 |
| Bra001208.1-P | Field mustard | nucleus | 11.26 | 9.31 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G183600.3 | EnsemblPlantsGene:TraesCS4D01G183600 | InterPro:Fip1 | ncoils:Coil | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 |
| PFAM:PF05182 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:321798345..321806922
Molecular Weight (calculated)
119408.0 Da
IEP (calculated)
6.904
GRAVY (calculated)
-1.112
Length
1048 amino acids
Sequence
(BLAST)
(BLAST)
0001: MCSSMADPAD AATAPANDDD VDDLYADLDD QVTAALAAAG ESGGSNAKDS DPATDAEAEA DAIEAVDLGD GLTGYSSSDE ESEDDLHIVL NEDGCAPPPP
0101: SAGRCEEGWA EECEEGELRA SLLKSLSAKD GGQRKLHGLR YKGPLDKTTV AITGQGDLGH QHAFQKNYYF FLPRNRTVFD INIEAFQQKP WRQHGIDLTD
0201: YFNFGLDEEG WRKYCFGMKQ FTQGARSLAE KSSGMDQESH HNLESSKLMP KSAIYSGFEG SNDVAKPKGR AIDVQGGLFE RLPSADMWRP RERDSDVVIQ
0301: VNMMLSPSNH STSDDNSTVN DKCMTAERVL VNDPGVKCLK NTNHLVDKVV HKEVLNGGSS ECTGSKLDTR DSASTRDHFS SPRYSDMLSE ESTEDCYFKR
0401: ANRYPNSKAT CSDTKLKNVY AKSDFCRHSS KSDQESAKGD SHSYTPSPAD DRYDKTDEPD FMSSGVFMNR QSDHRLLKYG HQERKEQKRK GSAHVRHDVF
0501: EKEEKIAYSY ASRYDRKHEE KRSSSTFLGN DCRNAVHNQV YERRDYSPAE RAALRNGMHR FSTISNHHHD RSSWHEFNDD QDDLQRLSLA KGWQRRHDHR
0601: YGYKSVQKAE LSDDIDRHMY RESYYQETRR VRHGHGEDDG LFDYNDYRFG EFCGPEVRRK YRSRRSAESS DEHWRHPYHL VSPPRANDYL KNPERNWSSP
0701: GLTSLSSRNS RNAKFMQYHH DEYYQNNKHH NSSVHVDNIQ QSVSFTAAPS ETGYCILPVK RKLHAGLGSM SRKDLLGVAI SKGRRLKQDQ FMISDRKLCA
0801: VEMHNSPKET VREAIYSFSD MRDSNTISNI HDERRHEHMN IQPKDADSIR LNDRKRKFKL QGNEIRRVES DTEGCLPADK NLHSSKHKDV HQKAQRMKLN
0901: RSYYQSVYQG SEKTANQRRQ TSKEEDEIEE GELIEEDHQD TAPNRKPNKP RNAALKSVIE ASSGGQLEMM NAASKDICDK GATRECDEKH ILKVMEKMQK
1001: RRERFKEAVT VIQKEQDNGK DELLAVACGA DGVKNQRPAR KRRWGGNG
0101: SAGRCEEGWA EECEEGELRA SLLKSLSAKD GGQRKLHGLR YKGPLDKTTV AITGQGDLGH QHAFQKNYYF FLPRNRTVFD INIEAFQQKP WRQHGIDLTD
0201: YFNFGLDEEG WRKYCFGMKQ FTQGARSLAE KSSGMDQESH HNLESSKLMP KSAIYSGFEG SNDVAKPKGR AIDVQGGLFE RLPSADMWRP RERDSDVVIQ
0301: VNMMLSPSNH STSDDNSTVN DKCMTAERVL VNDPGVKCLK NTNHLVDKVV HKEVLNGGSS ECTGSKLDTR DSASTRDHFS SPRYSDMLSE ESTEDCYFKR
0401: ANRYPNSKAT CSDTKLKNVY AKSDFCRHSS KSDQESAKGD SHSYTPSPAD DRYDKTDEPD FMSSGVFMNR QSDHRLLKYG HQERKEQKRK GSAHVRHDVF
0501: EKEEKIAYSY ASRYDRKHEE KRSSSTFLGN DCRNAVHNQV YERRDYSPAE RAALRNGMHR FSTISNHHHD RSSWHEFNDD QDDLQRLSLA KGWQRRHDHR
0601: YGYKSVQKAE LSDDIDRHMY RESYYQETRR VRHGHGEDDG LFDYNDYRFG EFCGPEVRRK YRSRRSAESS DEHWRHPYHL VSPPRANDYL KNPERNWSSP
0701: GLTSLSSRNS RNAKFMQYHH DEYYQNNKHH NSSVHVDNIQ QSVSFTAAPS ETGYCILPVK RKLHAGLGSM SRKDLLGVAI SKGRRLKQDQ FMISDRKLCA
0801: VEMHNSPKET VREAIYSFSD MRDSNTISNI HDERRHEHMN IQPKDADSIR LNDRKRKFKL QGNEIRRVES DTEGCLPADK NLHSSKHKDV HQKAQRMKLN
0901: RSYYQSVYQG SEKTANQRRQ TSKEEDEIEE GELIEEDHQD TAPNRKPNKP RNAALKSVIE ASSGGQLEMM NAASKDICDK GATRECDEKH ILKVMEKMQK
1001: RRERFKEAVT VIQKEQDNGK DELLAVACGA DGVKNQRPAR KRRWGGNG
001: MDSTDDDFGD LYVDDAKFQA TDAFESECAT NSGEDKGFEE TVKSDSEGEV KKFDVVAKDS SPCDDDDCAM NLTEADEESE FSDSDDDLNI VLKDDDSKAL
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
Arabidopsis Description
FIPS3FIP1[III]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JC20]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.