Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39524 | Sorghum | cytosol | 12.04 | 41.84 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 58.37 | 30.65 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 60.0 | 27.97 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 59.8 | 27.96 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 58.98 | 27.58 |
| Zm00001d028902_P003 | Maize | nucleus | 45.51 | 21.02 |
| KRH11949 | Soybean | nucleus | 20.0 | 8.93 |
| AT3G66652.3 | Thale cress | nucleus | 17.96 | 8.83 |
| KRH36974 | Soybean | nucleus | 18.78 | 8.39 |
| CDY57616 | Canola | nucleus | 16.73 | 8.12 |
| CDY57615 | Canola | plastid | 3.88 | 8.05 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 19.8 | 7.46 |
| Solyc12g099280.1.1 | Tomato | nucleus | 17.14 | 7.43 |
| PGSC0003DMT400011772 | Potato | nucleus | 16.94 | 7.35 |
| CDX74095 | Canola | nucleus | 17.76 | 6.86 |
| Bra001208.1-P | Field mustard | nucleus | 16.94 | 6.55 |
| Os03t0308850-00 | Rice | mitochondrion, nucleus | 1.84 | 4.5 |
Protein Annotations
| EnsemblPlants:Os03t0308900-01 | EnsemblPlantsGene:Os03g0308900 | InterPro:Fip1 | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 | PFAM:PF05182 |
| SEG:seg | UniParc:UPI0003938CBF | MapMan:35.1 | : | : | : |
Description
Similar to Fip1 motif family protein, expressed. (Os03t0308900-01)
Coordinates
chr3:-:11003793..11006469
Molecular Weight (calculated)
53700.9 Da
IEP (calculated)
4.884
GRAVY (calculated)
-0.937
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPEDAAAA AAAGNEDDVE DLYADLDDQV AAALAAAGES GGSNPATDGE AEAEAPGAHH TEADANEAVD LGDGTAGYIS SDEESEDDLH IVLNEDGAAP
101: PPPPPAGRCE EGSEEGEVSG SCVKGLSTDG GRGKLGELHR KGLFEKTTAP ITGQGDRSHQ HAFQKEFNFF LPRNRTVFDV DIEAFQEKPW RQHGVDLTDY
201: FNFGLDEESW RKYCFDMEHF RHGTRTLANE LSGLQQEFHY NLGLSKSVPK SEIYSVLKEG NGIAKPKGRA IHVEGGMHER LPSADMWPPR QRDSDVIQVN
301: MMFPPSNRSS SDDRSTVNDK CITTKRCGPS NNHPGVDEYL KETSSVVDRV VDKEVHKRGS SECTRSKTVL GDSACAGAQS STPDNSDMLS EESTEDFHFK
401: RKRGKSNSNA FYVETNRKDE HVLSDFCRHA SKSDQESSKG ESHRYTPSPA DDRYHKATKR QRMDEAGACI SSRSLNNCQS DHHLHESGHR
101: PPPPPAGRCE EGSEEGEVSG SCVKGLSTDG GRGKLGELHR KGLFEKTTAP ITGQGDRSHQ HAFQKEFNFF LPRNRTVFDV DIEAFQEKPW RQHGVDLTDY
201: FNFGLDEESW RKYCFDMEHF RHGTRTLANE LSGLQQEFHY NLGLSKSVPK SEIYSVLKEG NGIAKPKGRA IHVEGGMHER LPSADMWPPR QRDSDVIQVN
301: MMFPPSNRSS SDDRSTVNDK CITTKRCGPS NNHPGVDEYL KETSSVVDRV VDKEVHKRGS SECTRSKTVL GDSACAGAQS STPDNSDMLS EESTEDFHFK
401: RKRGKSNSNA FYVETNRKDE HVLSDFCRHA SKSDQESSKG ESHRYTPSPA DDRYHKATKR QRMDEAGACI SSRSLNNCQS DHHLHESGHR
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.