Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57616 | Canola | nucleus | 38.11 | 37.62 |
| CDX74095 | Canola | nucleus | 37.81 | 29.73 |
| Bra001208.1-P | Field mustard | nucleus | 37.61 | 29.6 |
| Os03t0308900-01 | Rice | nucleus | 8.83 | 17.96 |
| KXG39524 | Sorghum | cytosol | 2.51 | 17.73 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 13.54 | 12.88 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 13.14 | 12.5 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 13.14 | 12.46 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 11.43 | 12.22 |
| KRH11949 | Soybean | nucleus | 12.34 | 11.2 |
| KRH36974 | Soybean | nucleus | 12.24 | 11.12 |
| Zm00001d028902_P003 | Maize | nucleus | 11.74 | 11.03 |
| AT5G58040.1 | Thale cress | nucleus | 13.04 | 10.87 |
| PGSC0003DMT400011772 | Potato | nucleus | 12.04 | 10.62 |
| Solyc12g099280.1.1 | Tomato | nucleus | 11.63 | 10.27 |
| Os03t0308850-00 | Rice | mitochondrion, nucleus | 2.01 | 10.0 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 12.24 | 9.38 |
Protein Annotations
| MapMan:35.1 | EntrezGene:819846 | ProteinID:AAG50995.1 | ProteinID:AAG51321.1 | ProteinID:AEE74427.1 | ProteinID:AEE74428.1 |
| ProteinID:ANM64486.1 | ArrayExpress:AT3G66652 | EnsemblPlantsGene:AT3G66652 | RefSeq:AT3G66652 | TAIR:AT3G66652 | RefSeq:AT3G66652-TAIR-G |
| EnsemblPlants:AT3G66652.3 | Unigene:At.54050 | ncoils:Coil | UniProt:F4JC20 | InterPro:Fip1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005847 | GO:GO:0006139 | GO:GO:0006378 | GO:GO:0006397 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0098789 | RefSeq:NP_001189830.1 | RefSeq:NP_001326511.1 |
| RefSeq:NP_187318.2 | PFAM:PF05182 | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 | UniParc:UPI0001E92D85 | SEG:seg |
Description
FIPS3FIP1[III]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JC20]
Coordinates
chr3:+:2083889..2087793
Molecular Weight (calculated)
115376.0 Da
IEP (calculated)
5.899
GRAVY (calculated)
-1.269
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTDDDFGD LYVDDAKFQA TDAFESECAT NSGEDKGFEE TVKSDSEGEV KKFDVVAKDS SPCDDDDCAM NLTEADEESE FSDSDDDLNI VLKDDDSKAL
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.