Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011772 | Potato | nucleus | 88.05 | 88.05 |
| Os03t0308900-01 | Rice | nucleus | 7.43 | 17.14 |
| KXG39524 | Sorghum | cytosol | 1.86 | 14.89 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 15.75 | 13.69 |
| KRH11949 | Soybean | nucleus | 12.48 | 12.84 |
| KRH36974 | Soybean | nucleus | 12.3 | 12.67 |
| Zm00001d028902_P003 | Maize | nucleus | 11.5 | 12.25 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 11.15 | 12.02 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 11.06 | 11.93 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 11.06 | 11.89 |
| AT3G66652.3 | Thale cress | nucleus | 10.27 | 11.63 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 9.56 | 11.58 |
| Solyc07g005320.2.1 | Tomato | nucleus | 12.3 | 10.07 |
| Os03t0308850-00 | Rice | mitochondrion, nucleus | 1.77 | 10.0 |
| Bra001208.1-P | Field mustard | nucleus | 10.27 | 9.16 |
| CDY57615 | Canola | plastid | 1.15 | 5.51 |
Protein Annotations
| MapMan:35.1 | InterPro:Fip1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005847 |
| GO:GO:0006139 | GO:GO:0006378 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0098789 |
| UniProt:K4DHU9 | PFAM:PF05182 | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 | EnsemblPlantsGene:Solyc12g099280.1 | EnsemblPlants:Solyc12g099280.1.1 |
| UniParc:UPI000276A6B9 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:66475578..66484077
Molecular Weight (calculated)
128780.0 Da
IEP (calculated)
5.762
GRAVY (calculated)
-1.113
Length
1130 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVNIAGDDDD DFGDLYADVE VQASSAINAL QSSMLVQTEV NEVDYNASVG NCNRENAVRG EEDRESESGD DLNILLNDDE GDDDFLNAGC DEDEIEGNGG
0101: FIVSDKGNGL GQNSNGSGSG DGEKNSYKNT RPPQAAYSNH LKANGSSCAP SYCTTFVKGN WEDNSYTQRV GSSFAAQNGQ SFSLPRSRNI LDVNIDMFEK
0201: KPWRYPGSDL TDYFNFGFDE DSWKQYCNCL DEHREQAKKV FKESDYKTPK ISKPKGREIE VEESMIERLP STDVERPQYR DSSVVIQIAL QQSMEDPISS
0301: TKEQKEASEN GDVGGDKKEF LCFSSACEDE LASLEGTGEG SGNSTSGRNT PVCEHVSMGS DNYENSEYSD ADERHHQEGT YCNVDQTSGA IKSTHDANKS
0401: SERDISDPRQ PIKLQEPLCG GGREHSPGSS CCSLSHGGTS GDGTFLNLEK SHDHHTRLIS NAESELREKG TTDYQPISRT DHNRTKSGDF KYFTQGRRSV
0501: QRDLLHDRRR PGRMGETIPA HLKDEDSHKS DARILYERRN SSVIRHRQRD RRYAFDSHER EDTSHFKRAE PFYSNAGRFS DYPCRGSFTK NPQMEYQLRC
0601: RYDKNWSGGR SVKRKLDHLE LSTYTDDKLL ERDRPHYGGR LTVQDMENIS FHESEQWIDK YISYSDDENP SQRIRKIDQL PKKKRVRTDD LVTECNYIYD
0701: IMEETDNRYR PYNHRDTDIL EDGYDVNLTY FRREIKSPSR GQRRDISPCK SSNDICFMDL KDMGGRFDGY RPSSFCLYRE SCTSSRRWQS LELPRGRNRI
0801: FSGTRKCDGG QFASLTNSIG ANQTIKYPAN QDIFKRRRGG RQSEGMQWVE DENNSGYQEN VFDAERTSYS FRRTSSDKRF KSFDNNHGPN PVEKLLDDRH
0901: VEQEKYKLIR EGNNANQFGQ GSKVFHKDNH WRRFPRGRDS VDTDLIVENG ESSGRCSKAG GVTSFDRYGH LDSDCYLKLK PVDGTSKLHF RETLRTRNVT
1001: TDPKENDKER LAIFSDANQE ESLDIEEGQI IEEMNEKIVK KRITYSGKSE IGEMKNFATG KNVEGQGSPK ILEIIAKMEK RGERFKQPIA LKSDTKNIST
1101: PLVDSFAVST EPMQPRPARK RRWAASKATV
0101: FIVSDKGNGL GQNSNGSGSG DGEKNSYKNT RPPQAAYSNH LKANGSSCAP SYCTTFVKGN WEDNSYTQRV GSSFAAQNGQ SFSLPRSRNI LDVNIDMFEK
0201: KPWRYPGSDL TDYFNFGFDE DSWKQYCNCL DEHREQAKKV FKESDYKTPK ISKPKGREIE VEESMIERLP STDVERPQYR DSSVVIQIAL QQSMEDPISS
0301: TKEQKEASEN GDVGGDKKEF LCFSSACEDE LASLEGTGEG SGNSTSGRNT PVCEHVSMGS DNYENSEYSD ADERHHQEGT YCNVDQTSGA IKSTHDANKS
0401: SERDISDPRQ PIKLQEPLCG GGREHSPGSS CCSLSHGGTS GDGTFLNLEK SHDHHTRLIS NAESELREKG TTDYQPISRT DHNRTKSGDF KYFTQGRRSV
0501: QRDLLHDRRR PGRMGETIPA HLKDEDSHKS DARILYERRN SSVIRHRQRD RRYAFDSHER EDTSHFKRAE PFYSNAGRFS DYPCRGSFTK NPQMEYQLRC
0601: RYDKNWSGGR SVKRKLDHLE LSTYTDDKLL ERDRPHYGGR LTVQDMENIS FHESEQWIDK YISYSDDENP SQRIRKIDQL PKKKRVRTDD LVTECNYIYD
0701: IMEETDNRYR PYNHRDTDIL EDGYDVNLTY FRREIKSPSR GQRRDISPCK SSNDICFMDL KDMGGRFDGY RPSSFCLYRE SCTSSRRWQS LELPRGRNRI
0801: FSGTRKCDGG QFASLTNSIG ANQTIKYPAN QDIFKRRRGG RQSEGMQWVE DENNSGYQEN VFDAERTSYS FRRTSSDKRF KSFDNNHGPN PVEKLLDDRH
0901: VEQEKYKLIR EGNNANQFGQ GSKVFHKDNH WRRFPRGRDS VDTDLIVENG ESSGRCSKAG GVTSFDRYGH LDSDCYLKLK PVDGTSKLHF RETLRTRNVT
1001: TDPKENDKER LAIFSDANQE ESLDIEEGQI IEEMNEKIVK KRITYSGKSE IGEMKNFATG KNVEGQGSPK ILEIIAKMEK RGERFKQPIA LKSDTKNIST
1101: PLVDSFAVST EPMQPRPARK RRWAASKATV
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.