Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36974 | Soybean | nucleus | 16.92 | 20.05 |
| Os03t0308850-00 | Rice | mitochondrion, nucleus | 3.08 | 20.0 |
| KRH11949 | Soybean | nucleus | 16.85 | 19.95 |
| Os03t0308900-01 | Rice | nucleus | 7.46 | 19.8 |
| KXG39524 | Sorghum | cytosol | 2.0 | 18.44 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 13.54 | 16.79 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 13.46 | 16.65 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 13.31 | 16.51 |
| PGSC0003DMT400011772 | Potato | nucleus | 13.69 | 15.75 |
| Solyc12g099280.1.1 | Tomato | nucleus | 13.69 | 15.75 |
| Zm00001d028902_P003 | Maize | nucleus | 12.85 | 15.74 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 11.23 | 15.65 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 14.69 | 12.96 |
| AT3G66652.3 | Thale cress | nucleus | 9.38 | 12.24 |
| Bra001208.1-P | Field mustard | nucleus | 8.31 | 8.52 |
| CDY57615 | Canola | plastid | 0.92 | 5.08 |
Protein Annotations
| EntrezGene:100258583 | wikigene:100258583 | MapMan:35.1 | ProteinID:CBI22883 | ProteinID:CBI22883.3 | UniProt:D7SYL3 |
| EMBL:FN595246 | InterPro:Fip1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005847 |
| GO:GO:0006139 | GO:GO:0006378 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0098789 |
| EntrezGene:LOC100258583 | wikigene:LOC100258583 | PFAM:PF05182 | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 | UniParc:UPI00019832AF |
| ArrayExpress:VIT_05s0077g01000 | EnsemblPlantsGene:VIT_05s0077g01000 | EnsemblPlants:VIT_05s0077g01000.t01 | unigene:Vvi.25844 | RefSeq:XP_002272609 | RefSeq:XP_002272609.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:771998..782552
Molecular Weight (calculated)
147802.0 Da
IEP (calculated)
6.501
GRAVY (calculated)
-1.119
Length
1300 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDVGDDFGD LYADVEIPAS SAINGAPNFV RFYENDTHKA EDFASGSGSK ELDIGDAGSS RKSENEESNV VDNGSDSEDD FNIVLNDEDG QRFPVRSGVG
0101: VLGGSDGEDG DGMEQGFAGG ERGNGAKSGY HLQFSQYKYI RSHSTVFPSN AKANGTAKVA SFSSMLARGD WEENGSNQHK GSSSVEIAST HTRAAPLVAQ
0201: GGYGFSLPWY RTILDVNIDT FEQKPWRHPG VDLTDFFNFG FNEETWKNYC NSLEQYRKQM HILNQTPVHH SSKPNQTEEG GLEHEKDGQE PVCKQGSIVS
0301: PTSKSTDRLE LPKGRAIQVE GSTGERQPSM DVRRPRHRDS GVVIHIAVQD SVDDEIDNID STEDESSENG DFKVGDNKDI HCYGSGNGNK PCLEKNVTLD
0401: RSSVLKRFSK LSTASNPVSV DSDNVGTGKI PDGDKHCSQN MNAHVPEGIS EVLDALNNSK EMVGRNTCNT DPCMMETELS LDEQVSHSPS SSRRGSHSVA
0501: SQDGGYIDPE KNQNARRKPS SNLLTDRPEL IKSEYYLHKN SKNKVGKTKP IDCKDSFRNR SPVQEARKHR DSSTCSVDKM AIRSGNDIAS PMSKTVDSLY
0601: DRNHSSVGHG RQKERLHDFG SHDDDVSPMS NSEGLHYKHY LSAGRRRRKE RLCDLGSYDG DFSPMSDVEG MHSRAHSSVV RQGRKERLDD FGSYDNDIFP
0701: VSETEGLSDK GHSFASRRRR KELHDFDSYD RKGFSYYRET ELSFNYCSEK FANNHVQTAS AENPHWKDHR SFRDEMYPHF RNKYIFEKRI TRAGNKMMER
0801: DWYHRERNVS IEDIDTLTHR ESRRLVLKYS YSDKERDTRR RKKNDKLQFQ EGPDNDDDLF QCKNTDDVAQ EKITRSVPFM CKERNSLAEK YGRHVPSTGR
0901: KVNLYGRRKR YEDGHLDLDS SWSIGVEDEY GRHVDHQSLS SWSYREPHTA NGRNDVNDSR LTERHGRDRR QICPQGYRES DWFGNDNDAY NTKDSIIGPD
1001: DQVQIGRRRS RRQYEALHWT EKELISSHLD ENLYNEEASL SYERTSGHTR IHTKYGSAHV GMLVHNKKSQ QQRYKRIREG RSDDFIDRSS NVLGQGNHEQ
1101: AVLRSRASVD LIVGEGKSSG RRSEARSAVH HDRFENMDWK IDEDQGILKD VNGPQRGKII QPDLKSESNW NNEKCLDKFL VTEHDEALDI EEGQIIPEEM
1201: NEDDSVETKD ASESITPSRN VKRRLGNANA ANGNKVVAEC DNQRILQTLA KMEKRQERFK KPITLKKEPD KIPKPQVDPI VEMAETMQQR PLRKRRWNGS
0101: VLGGSDGEDG DGMEQGFAGG ERGNGAKSGY HLQFSQYKYI RSHSTVFPSN AKANGTAKVA SFSSMLARGD WEENGSNQHK GSSSVEIAST HTRAAPLVAQ
0201: GGYGFSLPWY RTILDVNIDT FEQKPWRHPG VDLTDFFNFG FNEETWKNYC NSLEQYRKQM HILNQTPVHH SSKPNQTEEG GLEHEKDGQE PVCKQGSIVS
0301: PTSKSTDRLE LPKGRAIQVE GSTGERQPSM DVRRPRHRDS GVVIHIAVQD SVDDEIDNID STEDESSENG DFKVGDNKDI HCYGSGNGNK PCLEKNVTLD
0401: RSSVLKRFSK LSTASNPVSV DSDNVGTGKI PDGDKHCSQN MNAHVPEGIS EVLDALNNSK EMVGRNTCNT DPCMMETELS LDEQVSHSPS SSRRGSHSVA
0501: SQDGGYIDPE KNQNARRKPS SNLLTDRPEL IKSEYYLHKN SKNKVGKTKP IDCKDSFRNR SPVQEARKHR DSSTCSVDKM AIRSGNDIAS PMSKTVDSLY
0601: DRNHSSVGHG RQKERLHDFG SHDDDVSPMS NSEGLHYKHY LSAGRRRRKE RLCDLGSYDG DFSPMSDVEG MHSRAHSSVV RQGRKERLDD FGSYDNDIFP
0701: VSETEGLSDK GHSFASRRRR KELHDFDSYD RKGFSYYRET ELSFNYCSEK FANNHVQTAS AENPHWKDHR SFRDEMYPHF RNKYIFEKRI TRAGNKMMER
0801: DWYHRERNVS IEDIDTLTHR ESRRLVLKYS YSDKERDTRR RKKNDKLQFQ EGPDNDDDLF QCKNTDDVAQ EKITRSVPFM CKERNSLAEK YGRHVPSTGR
0901: KVNLYGRRKR YEDGHLDLDS SWSIGVEDEY GRHVDHQSLS SWSYREPHTA NGRNDVNDSR LTERHGRDRR QICPQGYRES DWFGNDNDAY NTKDSIIGPD
1001: DQVQIGRRRS RRQYEALHWT EKELISSHLD ENLYNEEASL SYERTSGHTR IHTKYGSAHV GMLVHNKKSQ QQRYKRIREG RSDDFIDRSS NVLGQGNHEQ
1101: AVLRSRASVD LIVGEGKSSG RRSEARSAVH HDRFENMDWK IDEDQGILKD VNGPQRGKII QPDLKSESNW NNEKCLDKFL VTEHDEALDI EEGQIIPEEM
1201: NEDDSVETKD ASESITPSRN VKRRLGNANA ANGNKVVAEC DNQRILQTLA KMEKRQERFK KPITLKKEPD KIPKPQVDPI VEMAETMQQR PLRKRRWNGS
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.