Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G182200.1 | Wheat | nucleus | 94.77 | 95.04 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 89.82 | 90.08 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 72.31 | 81.46 |
| Os03t0308900-01 | Rice | nucleus | 27.97 | 60.0 |
| KXG39524 | Sorghum | cytosol | 6.37 | 47.52 |
| Zm00001d028902_P003 | Maize | nucleus | 42.53 | 42.13 |
| KRH36974 | Soybean | nucleus | 15.98 | 15.31 |
| KRH11949 | Soybean | nucleus | 15.7 | 15.03 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 16.65 | 13.46 |
| AT3G66652.3 | Thale cress | nucleus | 12.46 | 13.14 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 15.03 | 12.2 |
| CDY57616 | Canola | nucleus | 11.13 | 11.58 |
| PGSC0003DMT400011772 | Potato | nucleus | 11.99 | 11.15 |
| Solyc12g099280.1.1 | Tomato | nucleus | 11.89 | 11.06 |
| CDX74095 | Canola | nucleus | 11.8 | 9.78 |
| CDY57615 | Canola | plastid | 2.19 | 9.75 |
| Bra001208.1-P | Field mustard | nucleus | 11.42 | 9.47 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G122300.2 | EnsemblPlantsGene:TraesCS4A01G122300 | InterPro:Fip1 | ncoils:Coil | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 |
| PFAM:PF05182 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:151298909..151307604
Molecular Weight (calculated)
119780.0 Da
IEP (calculated)
6.635
GRAVY (calculated)
-1.117
Length
1051 amino acids
Sequence
(BLAST)
(BLAST)
0001: MCSSMADPAD AATAPANDDD VDDLYADLDD QVTAALAAAG ESGGSNAKDS DPATDAEADA DAIEAVDLGD GLAGYSSSDE ESEDDLHIVL NEDGCAPPPP
0101: SAGRCEEGWA EESEEGELRA SLLKSLSAKD GGQRKLHGLH YKGPLDKTTV AITGQGDLGH QHAFQKDYYF FLPRNRTVFD INIEAFQQKP WRQHGIDLTD
0201: YFNFGLDEEG WRKYCFGMKQ FTQGARSLAE KSSGMDQESH HNLESSKLMP KSAIYSGFEG SNDVAKPKGR AIDVQGGLFE RLPSADMWRP RERDSDVVIQ
0301: VNMMLSPSNH STSDDSSTVN DKCMTTESEC RVLVNDPGVK CLKDTNHLVD KVVPKEVLNG GSSECTGSKL DTRDSASTRD HFSSPRYSDM LSEESTEDCY
0401: FKRANRYPNS KATCSDTKLK NVYAKSDFCR HSSKSDQESA KGDSHSYTPS PADDRYDKTD EPDFMSSGVF MNRQSDHRLL KYGHQERKEQ KRKGSAYVRH
0501: DAFEKEEKIA YSYASRYDRK HEEKRSSSTF LGNDCRNAVH NQVYERRDYS PAERAALRNG VHRFSTISNH HHDRFSRHEF NDDQDDLQRL SLAKGWQRRH
0601: DHGYGYKSVQ KAELFDDIDR HMYRESYYQE TRRVRHGHDE EDELFDYNDY RFGEFCGPEV RRKYRSRRSA ESSDEHWRHP YHFVSPPRAN DYPKNPERNW
0701: SSPGLTSLSS RNSRNAKFMQ YHHDEYYQNN KHHNSSAHID NIQQSVSFTA APCETGYGIL PVKRKLHAGL GSMSRKDLLG IAISKGRRLK HDQFMISDRK
0801: LYAVEMHNSP KETVREAIYS FSDMRDSNTI SNIHDERRHE HMNIQPKDTA SIRLNDRKRK FKLQGNEIRR VESDNEGCLP ADKNLHSSKH KDVHQKAQKV
0901: KLNRSYYQSV CQGLEKTTNQ RRQTTKEEDE IEEGEVIEED HQDTAPNRKP NKPRNTALKS VIEASSGGQL EMINATSKDI CDNGATRECD EKHILKVMEK
1001: MQKRRERFKE AVTVTQKEQD NGKDELLAVA CGADDVKNQR PARKRRWGGN G
0101: SAGRCEEGWA EESEEGELRA SLLKSLSAKD GGQRKLHGLH YKGPLDKTTV AITGQGDLGH QHAFQKDYYF FLPRNRTVFD INIEAFQQKP WRQHGIDLTD
0201: YFNFGLDEEG WRKYCFGMKQ FTQGARSLAE KSSGMDQESH HNLESSKLMP KSAIYSGFEG SNDVAKPKGR AIDVQGGLFE RLPSADMWRP RERDSDVVIQ
0301: VNMMLSPSNH STSDDSSTVN DKCMTTESEC RVLVNDPGVK CLKDTNHLVD KVVPKEVLNG GSSECTGSKL DTRDSASTRD HFSSPRYSDM LSEESTEDCY
0401: FKRANRYPNS KATCSDTKLK NVYAKSDFCR HSSKSDQESA KGDSHSYTPS PADDRYDKTD EPDFMSSGVF MNRQSDHRLL KYGHQERKEQ KRKGSAYVRH
0501: DAFEKEEKIA YSYASRYDRK HEEKRSSSTF LGNDCRNAVH NQVYERRDYS PAERAALRNG VHRFSTISNH HHDRFSRHEF NDDQDDLQRL SLAKGWQRRH
0601: DHGYGYKSVQ KAELFDDIDR HMYRESYYQE TRRVRHGHDE EDELFDYNDY RFGEFCGPEV RRKYRSRRSA ESSDEHWRHP YHFVSPPRAN DYPKNPERNW
0701: SSPGLTSLSS RNSRNAKFMQ YHHDEYYQNN KHHNSSAHID NIQQSVSFTA APCETGYGIL PVKRKLHAGL GSMSRKDLLG IAISKGRRLK HDQFMISDRK
0801: LYAVEMHNSP KETVREAIYS FSDMRDSNTI SNIHDERRHE HMNIQPKDTA SIRLNDRKRK FKLQGNEIRR VESDNEGCLP ADKNLHSSKH KDVHQKAQKV
0901: KLNRSYYQSV CQGLEKTTNQ RRQTTKEEDE IEEGEVIEED HQDTAPNRKP NKPRNTALKS VIEASSGGQL EMINATSKDI CDNGATRECD EKHILKVMEK
1001: MQKRRERFKE AVTVTQKEQD NGKDELLAVA CGADDVKNQR PARKRRWGGN G
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.