Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001208.1-P | Field mustard | nucleus | 93.14 | 93.21 |
| CDY57616 | Canola | nucleus | 62.15 | 78.02 |
| AT3G66652.3 | Thale cress | nucleus | 29.73 | 37.81 |
| CDY55018 | Canola | mitochondrion | 1.81 | 20.91 |
| Os03t0308900-01 | Rice | nucleus | 6.86 | 17.76 |
| KXG39524 | Sorghum | cytosol | 1.89 | 17.02 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 9.15 | 12.43 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 9.86 | 11.93 |
| CDX88655 | Canola | nucleus | 9.78 | 11.85 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 9.78 | 11.8 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 9.7 | 11.74 |
| CDY43886 | Canola | nucleus | 10.17 | 11.11 |
| Zm00001d028902_P003 | Maize | nucleus | 9.23 | 11.03 |
| CDY11833 | Canola | nucleus | 9.23 | 10.99 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 4.18 | 9.08 |
| Os03t0308850-00 | Rice | mitochondrion, nucleus | 1.42 | 9.0 |
| CDY57615 | Canola | plastid | 1.58 | 8.47 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078CBE0 | EnsemblPlants:CDX74095 | ProteinID:CDX74095 | ProteinID:CDX74095.1 |
| ncoils:Coil | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom | InterPro:Fip1 | GO:GO:0000413 |
| GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00111849001 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 |
| PFAM:PF05182 | PRINTS:PR00153 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF200 | SUPFAM:SSF50891 |
| TMHMM:TMhelix | UniParc:UPI0004EE99CA | SEG:seg | : | : | : |
Description
BnaA03g29520D
Coordinates
chrLK031800:-:1280677..1286740
Molecular Weight (calculated)
146091.0 Da
IEP (calculated)
6.331
GRAVY (calculated)
-1.159
Length
1268 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSTDDDFGE LYVDDKAHAT AFLAGDDVCE ESEHTPILPG ENKGFEVTEE PESRLEAKKL DDVDKDSSPC VDNNACAANR TEAKEESEYS DSDDDDDLNI
0101: VLKEDDSVAC GSNASNQRRS VGSWCTMPNS GMVVNGRMTM EDMNPSLGMP QCGYNNFSHT WSRANFHGFE KKPWRNPGVD VNDYFNFGFN EQSWKDYCNP
0201: GLKGRAIEVE GGTLGRTPSM DLRYPRELDP DVVIQIPVTA DVEELSSMTP VEAGSLSKPS NGESRSEEFH SDIGEDLHSS GDSMKEEVSV GCEDEYTGSF
0301: RGEQSTPKEN CRRREVTPCD KEVIEEEKEE TCWSSDKADS SSVESESSHR DRFRFSPTSS YSVGKTEESE DPGTESSKDG AIDDQREAST PPRRTRFAEH
0401: EANSTKCVER SDTGHSRHRR SHEDSSKRHY GRVDYEADRR TKHADASRIP DRDLGKKVCY GRGRSYRDSS RNWQNRPYFT LGKVGTEGRG LPHSDREKRL
0501: GRSYSPVDLD RDRGQRIGWR NNKEPSHGRG FDPSNGYKYE AGLKEYTSRS SFNPSQRNSR VSLNKEEDRY GRQHCERRYG RERSPARAYE SNKEDRYGRQ
0601: HCERKYSRER SPGLAYERNK ERRPYYQDRI PISDMECRYQ FEYCSINGRH NPNQSREDEP YYGRRCDYDY DFPRGRYEDE VQRTESGIPF ELAYREMHSF
0701: AEVGRREFER YEEDFSEIDR RHHYTTLGWH HDRFVSDNDG HNKYRVQGAW PTPSLPFRDS WQTKGSRGDS WRDETRDFTK REANDRQNNL LYKDAPRDGW
0801: TRNLVRGDNV SIQDRLRYDD DDDNWVRRDK RRYQLGDSVR EIAHSEHPSY TDEMLVTNIG VSAHDRISIK QRPGYFMSHV HETVERHQRS KKLRRDGNAF
0901: IKCQDPIDST GRQGKLANQS RIRFSNGRDT TEQQGRQKPR KVMGKGNEKA VVKIKGLIEK EEGEIIQEEE RKVTGTGIDE ERIQESIKKM ERRRERFKEP
1001: ELVAAKFHFQ TEQEAKTDVT NQKSCVSCLL LAMARIKPQA LLNQSKKKKG PSRISISTIV VCNLVVAVVV LSLVTTYRHW SQRSRNAIET QSQRFEDTNA
1101: ASEQKSYDLP GYADISTSKG LITVELFKDA SPEAVDRFLD LCQKDHFKGM PFHRVIKNYL VQAGHSQSSI PVEEWTSKGK LRGRLNTSPK HEAFMLGTPK
1201: TKGNNNNKDF ELLITTAPIP DLNDQLIVFG RVLKGEDVVQ EIEEVDTDEH YQPKSQIGII SVILKREL
0101: VLKEDDSVAC GSNASNQRRS VGSWCTMPNS GMVVNGRMTM EDMNPSLGMP QCGYNNFSHT WSRANFHGFE KKPWRNPGVD VNDYFNFGFN EQSWKDYCNP
0201: GLKGRAIEVE GGTLGRTPSM DLRYPRELDP DVVIQIPVTA DVEELSSMTP VEAGSLSKPS NGESRSEEFH SDIGEDLHSS GDSMKEEVSV GCEDEYTGSF
0301: RGEQSTPKEN CRRREVTPCD KEVIEEEKEE TCWSSDKADS SSVESESSHR DRFRFSPTSS YSVGKTEESE DPGTESSKDG AIDDQREAST PPRRTRFAEH
0401: EANSTKCVER SDTGHSRHRR SHEDSSKRHY GRVDYEADRR TKHADASRIP DRDLGKKVCY GRGRSYRDSS RNWQNRPYFT LGKVGTEGRG LPHSDREKRL
0501: GRSYSPVDLD RDRGQRIGWR NNKEPSHGRG FDPSNGYKYE AGLKEYTSRS SFNPSQRNSR VSLNKEEDRY GRQHCERRYG RERSPARAYE SNKEDRYGRQ
0601: HCERKYSRER SPGLAYERNK ERRPYYQDRI PISDMECRYQ FEYCSINGRH NPNQSREDEP YYGRRCDYDY DFPRGRYEDE VQRTESGIPF ELAYREMHSF
0701: AEVGRREFER YEEDFSEIDR RHHYTTLGWH HDRFVSDNDG HNKYRVQGAW PTPSLPFRDS WQTKGSRGDS WRDETRDFTK REANDRQNNL LYKDAPRDGW
0801: TRNLVRGDNV SIQDRLRYDD DDDNWVRRDK RRYQLGDSVR EIAHSEHPSY TDEMLVTNIG VSAHDRISIK QRPGYFMSHV HETVERHQRS KKLRRDGNAF
0901: IKCQDPIDST GRQGKLANQS RIRFSNGRDT TEQQGRQKPR KVMGKGNEKA VVKIKGLIEK EEGEIIQEEE RKVTGTGIDE ERIQESIKKM ERRRERFKEP
1001: ELVAAKFHFQ TEQEAKTDVT NQKSCVSCLL LAMARIKPQA LLNQSKKKKG PSRISISTIV VCNLVVAVVV LSLVTTYRHW SQRSRNAIET QSQRFEDTNA
1101: ASEQKSYDLP GYADISTSKG LITVELFKDA SPEAVDRFLD LCQKDHFKGM PFHRVIKNYL VQAGHSQSSI PVEEWTSKGK LRGRLNTSPK HEAFMLGTPK
1201: TKGNNNNKDF ELLITTAPIP DLNDQLIVFG RVLKGEDVVQ EIEEVDTDEH YQPKSQIGII SVILKREL
001: MDSTDDDFGD LYVDDAKFQA TDAFESECAT NSGEDKGFEE TVKSDSEGEV KKFDVVAKDS SPCDDDDCAM NLTEADEESE FSDSDDDLNI VLKDDDSKAL
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
Arabidopsis Description
FIPS3FIP1[III]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JC20]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.