Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39524 | Sorghum | cytosol | 8.77 | 65.96 |
| Os03t0308900-01 | Rice | nucleus | 21.02 | 45.51 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 42.32 | 42.84 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 42.13 | 42.53 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 41.28 | 41.79 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 34.59 | 39.34 |
| KRH36974 | Soybean | nucleus | 15.08 | 14.59 |
| KRH11949 | Soybean | nucleus | 14.8 | 14.3 |
| VIT_05s0077g01000.t01 | Wine grape | nucleus | 15.74 | 12.85 |
| AT3G66652.3 | Thale cress | nucleus | 11.03 | 11.74 |
| Solyc12g099280.1.1 | Tomato | nucleus | 12.25 | 11.5 |
| CDY57616 | Canola | nucleus | 10.74 | 11.29 |
| PGSC0003DMT400011772 | Potato | nucleus | 11.88 | 11.15 |
| Zm00001d013380_P001 | Maize | nucleus | 13.2 | 10.97 |
| Zm00001d033843_P007 | Maize | nucleus | 12.54 | 10.46 |
| CDY57615 | Canola | plastid | 2.17 | 9.75 |
| CDX74095 | Canola | nucleus | 11.03 | 9.23 |
| Bra001208.1-P | Field mustard | nucleus | 10.65 | 8.92 |
Protein Annotations
| EnsemblPlants:Zm00001d028902_P003 | EnsemblPlants:Zm00001d028902_T003 | EnsemblPlantsGene:Zm00001d028902 | InterPro:Fip1 | ncoils:Coil | PANTHER:PTHR13484 |
| PANTHER:PTHR13484:SF0 | PFAM:PF05182 | ProteinID:ONL97307.1 | SEG:seg | UniParc:UPI0008455C12 | UniProt:A0A1D6K0I7 |
| MapMan:35.2 | : | : | : | : | : |
Description
FIP1[III]-like protein
Coordinates
chr1:-:50201483..50230198
Molecular Weight (calculated)
121034.0 Da
IEP (calculated)
6.923
GRAVY (calculated)
-1.008
Length
1061 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADPLDAAAA FGVSTNDNNV DDVEDLYADL DEQVAAALAA AGESGGSNAR DSDPLTDGEG EFPEPDENEA VDLGDGTEGY SSSDDESDDG LRIVLNEDTS
0101: APLPPPPVGR GEGCVAEDEE GDDTSNRVKV SSVNDGGWAT TTSSLCFPRR LQRKSRISSL VKVGGLQCKG FVEKTTLPIM GQIDRHVFRR DYNFFLSRNS
0201: TIFDIDIEAF QLKPWRQQGA DLTDYFNFSL DEEGWRKYWC SMLSTPLFVQ KQLRLGARSL VNETSGLEQE SYKLKSAKAM SNVANDSGSE GRNDIGKPKG
0301: RAIHVEGSAC ERVPSADLWR PIQRDSDVVI QVNMTLSPSN QSTSDDSSKL NHKGVATERV FDKEVYDGGS SEGVGSKLDR RDSYFARDQS PSPDYSDVLS
0401: GESKENHYFK RSNRHSDFRD FFEATKLQDE HVKSDFYCYP SKPDRENSES CRRGYTPSTD DRNMASKLLW MGEAPFTGRG KSGDLFLGHN SDRDFKSRHK
0501: ARKGQRRQSL DDRRNAIFVE KEKPTDSYHS TCDRKFVKRR SSSSSLRTNY HNSVCNQSYE QRYSPLEKKA LKNDEHYFSD ESNYHHRQSL SCDINEGDID
0601: KCFSSAKEWQ RDGDHIYHSM VKTDMPDAND GRMYRDRYSP EKKIARHDHS MDVEFSHYTD YRFCEWRSLE VRGRYRDKGK FAKSNDGHFR HANHLELYSG
0701: LNNFERDKPA TGFPVMSSRN RCIDNKEVCN AKMTQNNCHG YHQKNKQHDS SFCIGNIPRY ALRTDTYAEK GHFVLPIKRK LYSDLGSMDQ RTLADLPLLK
0801: GRLMHGQSIA SDRRIYALKL HKSTKKINTE AICSSSDMRN INTLSNICVG RRHELDNADN IHLNDRKIKF EREGNELRRV IEDNQKGSHP VDKDLHTSRH
0901: KHVHQKLWKQ NLSHRHSGNQ DLEKSADQNC LNKDVEIEEG ELIEEDHNNI IYKSKLKQEN VVLKSVIETS SAEQLQVNNA TSKDATCNNR ATRESDEKHI
1001: LEVMEKMQKR RERFKEAIAP KKEVGDKKDL SALACSTDFI QNQRPARKRR WGGNCWMLEM P
0101: APLPPPPVGR GEGCVAEDEE GDDTSNRVKV SSVNDGGWAT TTSSLCFPRR LQRKSRISSL VKVGGLQCKG FVEKTTLPIM GQIDRHVFRR DYNFFLSRNS
0201: TIFDIDIEAF QLKPWRQQGA DLTDYFNFSL DEEGWRKYWC SMLSTPLFVQ KQLRLGARSL VNETSGLEQE SYKLKSAKAM SNVANDSGSE GRNDIGKPKG
0301: RAIHVEGSAC ERVPSADLWR PIQRDSDVVI QVNMTLSPSN QSTSDDSSKL NHKGVATERV FDKEVYDGGS SEGVGSKLDR RDSYFARDQS PSPDYSDVLS
0401: GESKENHYFK RSNRHSDFRD FFEATKLQDE HVKSDFYCYP SKPDRENSES CRRGYTPSTD DRNMASKLLW MGEAPFTGRG KSGDLFLGHN SDRDFKSRHK
0501: ARKGQRRQSL DDRRNAIFVE KEKPTDSYHS TCDRKFVKRR SSSSSLRTNY HNSVCNQSYE QRYSPLEKKA LKNDEHYFSD ESNYHHRQSL SCDINEGDID
0601: KCFSSAKEWQ RDGDHIYHSM VKTDMPDAND GRMYRDRYSP EKKIARHDHS MDVEFSHYTD YRFCEWRSLE VRGRYRDKGK FAKSNDGHFR HANHLELYSG
0701: LNNFERDKPA TGFPVMSSRN RCIDNKEVCN AKMTQNNCHG YHQKNKQHDS SFCIGNIPRY ALRTDTYAEK GHFVLPIKRK LYSDLGSMDQ RTLADLPLLK
0801: GRLMHGQSIA SDRRIYALKL HKSTKKINTE AICSSSDMRN INTLSNICVG RRHELDNADN IHLNDRKIKF EREGNELRRV IEDNQKGSHP VDKDLHTSRH
0901: KHVHQKLWKQ NLSHRHSGNQ DLEKSADQNC LNKDVEIEEG ELIEEDHNNI IYKSKLKQEN VVLKSVIETS SAEQLQVNNA TSKDATCNNR ATRESDEKHI
1001: LEVMEKMQKR RERFKEAIAP KKEVGDKKDL SALACSTDFI QNQRPARKRR WGGNCWMLEM P
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.