Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74095 | Canola | nucleus | 78.02 | 62.15 |
| AT3G66652.3 | Thale cress | nucleus | 37.62 | 38.11 |
| CDY55018 | Canola | mitochondrion | 2.08 | 19.09 |
| Os03t0308900-01 | Rice | nucleus | 8.12 | 16.73 |
| KXG39524 | Sorghum | cytosol | 1.78 | 12.77 |
| CDX88655 | Canola | nucleus | 12.77 | 12.33 |
| CDY43886 | Canola | nucleus | 13.86 | 12.06 |
| HORVU4Hr1G053460.2 | Barley | nucleus | 11.09 | 12.0 |
| TraesCS4A01G122300.2 | Wheat | nucleus | 11.58 | 11.13 |
| TraesCS4B01G182200.1 | Wheat | nucleus | 11.49 | 11.07 |
| CDY11833 | Canola | nucleus | 11.58 | 10.99 |
| TraesCS4D01G183600.3 | Wheat | nucleus | 11.39 | 10.97 |
| Zm00001d028902_P003 | Maize | nucleus | 11.29 | 10.74 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 6.14 | 10.62 |
| Os03t0308850-00 | Rice | mitochondrion, nucleus | 1.78 | 9.0 |
| CDY57615 | Canola | plastid | 1.88 | 8.05 |
Protein Annotations
| EnsemblPlants:CDY57616 | EnsemblPlantsGene:GSBRNA2T00022421001 | InterPro:Fip1 | PANTHER:PTHR13484 | PANTHER:PTHR13484:SF0 | PFAM:PF05182 |
| ProteinID:CDY57616 | ProteinID:CDY57616.1 | SEG:seg | UniParc:UPI0004EF161C | UniProt:A0A078J4F9 | MapMan:35.1 |
Description
BnaCnng32190DBnaCnng32190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4F9]
Coordinates
chrLK033589:-:16841..20723
Molecular Weight (calculated)
116945.0 Da
IEP (calculated)
5.954
GRAVY (calculated)
-1.354
Length
1010 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSTDDDFGE LYVDDKAHAT ASLAGDDVCE NKGFEVTLEP ESEGEAKKHD AEVVVDKDSS PAANRTEAKE ESEYSDSDSD DDDLNIVLKE DDSVACGSNA
0101: SNQRRSVGSW CTMPNSGMVN GRMRMEATSP SLVMPRCGYN NFSHTWSRGT FDANFNVFEK RPWRNPGVDV NDYFNFGFNE QSWKDYCNPG VKGRAIEVED
0201: GTLERTPSMD LRIPRELDPD VVIQIPVTDD VEELSSMTPV EARSLSKPSN GASRSEEFHS DIGEDLHSSG DSMKEEVSVG REEENTGSFR GEQSPPRENR
0301: CSREVTPCDK EIIEEEKEET CWSSDKADSS SVERESSLRD RFRFSPTSSY SVGKTEESED SGTESSKGGG ATGDQREAST PPRRTRFAEH EANSTKSVEK
0401: SDTEHSRHRR SHEGPSKRYC RRIDYGARRR TKHANASPTP DRDLGKKVCS GHGRSYRDSS KNWQKRPQFA LGKVGTEGRG FPQSDRGKRH GRSYSPVDLD
0501: RDRGQRLCWR NNKEPSHGRG FDPSNGYKYE AGLKEYTSRS SFNLNQRESR LSFNKEEDRY EDRYGRQHCE RKYSRERSPG LAYERNKERR RYDGVGEPYY
0601: QDRIPISDME YRYQFEYCSI NGRHNPNQSR EDEPYYGRSD YDYEFPRGRY EDEVQRTESE MPFELAYREM HSFAEVGRRE FERYEEDFSE IDRRHHYTTL
0701: GWHNDRFVSD NDGHNKYRVQ GAWPTPSLPF RDSWQTKGSR GDSWRDETRD FTKREANDRQ NNLLYKDAPR DGWTRNLVRG DNVSIQDRLR YDDDDDDDDD
0801: WVRRDKRSYQ LGDSVREIAH SAHPSYTDEM LVTNIGVSAH DRISIKQRRG YFMSHVHETV ERHQRSKKLR RDGNAFIKCQ DQINSTGRQG KLSNQSRIRF
0901: SNGRDTTEQQ DHQKPRNVMG KGNEKAVVKI KGLIEKEEGE IIQEEERNVT GTGIDEERIQ ESIKKMERRR ERFKEPELVA AKFHFQTEQG AKTDVTNQVR
1001: PVRKRRWGAS
0101: SNQRRSVGSW CTMPNSGMVN GRMRMEATSP SLVMPRCGYN NFSHTWSRGT FDANFNVFEK RPWRNPGVDV NDYFNFGFNE QSWKDYCNPG VKGRAIEVED
0201: GTLERTPSMD LRIPRELDPD VVIQIPVTDD VEELSSMTPV EARSLSKPSN GASRSEEFHS DIGEDLHSSG DSMKEEVSVG REEENTGSFR GEQSPPRENR
0301: CSREVTPCDK EIIEEEKEET CWSSDKADSS SVERESSLRD RFRFSPTSSY SVGKTEESED SGTESSKGGG ATGDQREAST PPRRTRFAEH EANSTKSVEK
0401: SDTEHSRHRR SHEGPSKRYC RRIDYGARRR TKHANASPTP DRDLGKKVCS GHGRSYRDSS KNWQKRPQFA LGKVGTEGRG FPQSDRGKRH GRSYSPVDLD
0501: RDRGQRLCWR NNKEPSHGRG FDPSNGYKYE AGLKEYTSRS SFNLNQRESR LSFNKEEDRY EDRYGRQHCE RKYSRERSPG LAYERNKERR RYDGVGEPYY
0601: QDRIPISDME YRYQFEYCSI NGRHNPNQSR EDEPYYGRSD YDYEFPRGRY EDEVQRTESE MPFELAYREM HSFAEVGRRE FERYEEDFSE IDRRHHYTTL
0701: GWHNDRFVSD NDGHNKYRVQ GAWPTPSLPF RDSWQTKGSR GDSWRDETRD FTKREANDRQ NNLLYKDAPR DGWTRNLVRG DNVSIQDRLR YDDDDDDDDD
0801: WVRRDKRSYQ LGDSVREIAH SAHPSYTDEM LVTNIGVSAH DRISIKQRRG YFMSHVHETV ERHQRSKKLR RDGNAFIKCQ DQINSTGRQG KLSNQSRIRF
0901: SNGRDTTEQQ DHQKPRNVMG KGNEKAVVKI KGLIEKEEGE IIQEEERNVT GTGIDEERIQ ESIKKMERRR ERFKEPELVA AKFHFQTEQG AKTDVTNQVR
1001: PVRKRRWGAS
001: MDSTDDDFGD LYVDDAKFQA TDAFESECAT NSGEDKGFEE TVKSDSEGEV KKFDVVAKDS SPCDDDDCAM NLTEADEESE FSDSDDDLNI VLKDDDSKAL
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
101: PASCVFNTNF GGYEASKASS FQRRWTRNAS ANNACIDPSL GMSQYRYSFP NPWSRTPFDV NLDVLEKKPW RDPGTDTSDF FNFGLNEQSW KDYCKPLGRA
201: IEVRGGTLER IPSADLRRPR DPDPGVVIQI PVTNDVEELP VRTPEKARCI TSNEASRSDV SHSYGSKDLN SVYGSPKDEA FVGCQEENAG SFSGEKSLPT
301: ENCCSREATP SDKEMLEKEK EESVCNSDET DPSSVERESS LGDRIRLSPT SSSSVGINEE SDDYETESLK DSATDDQREV STPPQEARLA EHEAISIKRG
401: EDSGTMHSRH RRSHEDSSKR HCGRAGYARY VKDASPTPDP GRGKKVGSLQ GLYRDSNKNW QNGPPITLER DETEGKGVHY YREKSHGRLN SSVDHDRHRE
501: HRFGWRNNKE SSLGRGFDHS NSYKCGTHLK EYTSRSSFDL NQRNSRSSFK EEDDRYGWHH RERKYVHERS PIRAYENYKE RNGCDWLREP YYEDCIPITD
601: MDYRYRSENS SAHAIHNLKH SPENDLYCRR RGGYDYNLHR DRYEDGVHRV ESRIPFELAY REMRSFAEVE MREYQGYKRH EEFSEIEKRH HYIHDWHLDR
701: FVSEEDGYKY RIQDGWSSPS LSLRDSWYTK EAKGDFRRDD TRDFRTPEAY DSQNNHFHKA APRDGWTQNL GRSHNVSVKD RLQYDADWVG PDRGRYNMAD
801: DMQCSMREVS NSEHPSYTDE IFVRDIRVPT HNRMATKQRF GYLQSHIHEN DERHHRSKKL RGDGHAFIKR QDHVDLAGRQ GKVSNQSKKR FSNGGDTIEQ
901: QDVQKPRKLM GKSEEKAMQN RDINDKEEGE IIEEVKGVEI DNERIQESLK KMEKRRERFK GTKLAVEATF KSQTELRAKA DVTNQQRPVR KRRWCAS
Arabidopsis Description
FIPS3FIP1[III]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4JC20]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.