Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70580 | Canola | cytosol, nucleus, plastid | 49.96 | 99.32 |
| CDY55018 | Canola | mitochondrion | 7.32 | 77.27 |
| CDX88655 | Canola | nucleus | 64.43 | 71.51 |
| AT5G58040.1 | Thale cress | nucleus | 73.39 | 71.24 |
| CDY11833 | Canola | nucleus | 57.97 | 63.19 |
| PGSC0003DMT400008250 | Potato | nucleus | 4.31 | 42.37 |
| KRH37905 | Soybean | nucleus | 40.57 | 35.74 |
| KRH12930 | Soybean | nucleus | 39.53 | 35.2 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 43.41 | 34.19 |
| Solyc07g005320.2.1 | Tomato | nucleus | 38.07 | 32.03 |
| Zm00001d013380_P001 | Maize | nucleus | 34.37 | 31.27 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 30.4 | 31.16 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 34.63 | 31.04 |
| Zm00001d033843_P007 | Maize | nucleus | 33.59 | 30.68 |
| KXG37677 | Sorghum | nucleus | 34.02 | 30.67 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 34.19 | 30.63 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 33.25 | 30.23 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 34.71 | 29.87 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 32.04 | 26.55 |
| CDY57616 | Canola | nucleus | 12.06 | 13.86 |
| CDX74095 | Canola | nucleus | 11.11 | 10.17 |
| CDY57615 | Canola | plastid | 1.81 | 8.9 |
Protein Annotations
| EnsemblPlants:CDY43886 | EnsemblPlantsGene:GSBRNA2T00077448001 | InterPro:Fip1 | PANTHER:PTHR36884 | PFAM:PF05182 | ProteinID:CDY43886 |
| ProteinID:CDY43886.1 | SEG:seg | UniParc:UPI0004EE2339 | UniProt:A0A078I251 | MapMan:16.2.1.2.6 | : |
Description
BnaC09g33570DBnaC09g33570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I251]
Coordinates
chrLK032571:-:224072..229131
Molecular Weight (calculated)
130026.0 Da
IEP (calculated)
5.504
GRAVY (calculated)
-1.387
Length
1161 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEDDEFGDL YSDVFQPPAV LPPPPPPLRS IDLNLRSQDQ DEPEEPNPPP VSRVSDTTAA SKLPPALPRD ANRDSGGGDD KDMTFDIEEP DADSAPLIPG
0101: LALDRGVATT IEEAGDGGGG DDWDSDSEDD LQIVLNDNNV MMGGDNRRSR MGDNDDDDDE EPLVIVTDTD QNQPMEDQLW GEDGLQGVEG EGKEGGGEAL
0201: KGSGPGGAVG PPKAGYSSHG YHPFHSQFKY VRPGAAPTLG GAASNAGTSS GQVRPPVNLG PVAGRGRGDW RPMGMRNPSV AQKGYHQAWG SNTAGRGLDF
0301: TLPSHKTIFE VDIETFEEKP WRYQGVDITD YFNFGLNEET WIDYCRQLDQ RRIETTMQSR IRVYESGRTD QGYDPDLPPE LAAATGAQGV PVGSSDLVKV
0401: ETAQGDSAKV PAHVRPALPP GRPIPVETGS GERQPSVDTR APRMRDLDAI IEIVCQDSHE DAPSGENDTE PAVSSLPIEN VPVETGYVNS RRPDGESAER
0501: SPTQDEPRKR LLRKQDDEIS RSTGSGQSFR SSSPVGDRGT MSSSVDREDM GGVAGKDAEM EEERKTSSAV QEDDGGESKT ERSSGNSKAR SESHRDHQQL
0601: KDSAEQEVIQ NKHSTRPASS KKHHDNSAPY QSRKNQDRGK EMERTRAASK GGREYSNPHT DVDYSIARGD DYDRRKERDV DGGFWRRKED DPFSRRGGDE
0701: GFRKRDREED LGSKQRGKMR ESDIRNKDDH VPSRKHLDDG GLRNSYELDD HIGKRRKDEE YLRRNRSEKN EISYGQREST SRLKRERGDR LDHQKRDVQH
0801: KSRDDFDDHS SLRHRDDFYM QRDGNERLRE REDMDKLKLT QEDGLSARGR ERQVPTTRGH RGSEDRSSMM KDDYKASEKE HLTKDSTRHS KQTKRREYHG
0901: EESSHHRGHG DFSARTDETV NNEKMPRQEK TSAKSDNVIN SMDGQQLQDR KHKDSRRKIK EQREGADSAR SKQGEENGSS EVTGSKGKNE ARNHRSEIPQ
1001: QTNATKRHKE DASSGDELQD SKRGRTKMER WASHKERDDV VTVKASSTSS KLQDKEKGTN GRVLEPVHDK NRDLTEEKSS HDLAETKDRS EKGPPGDRHL
1101: DTVEKLKKRS ERFKLPMPTE KDTTVVKKME SETLPSAKIE GPVDSEVKAE RPARKRRWTS S
0101: LALDRGVATT IEEAGDGGGG DDWDSDSEDD LQIVLNDNNV MMGGDNRRSR MGDNDDDDDE EPLVIVTDTD QNQPMEDQLW GEDGLQGVEG EGKEGGGEAL
0201: KGSGPGGAVG PPKAGYSSHG YHPFHSQFKY VRPGAAPTLG GAASNAGTSS GQVRPPVNLG PVAGRGRGDW RPMGMRNPSV AQKGYHQAWG SNTAGRGLDF
0301: TLPSHKTIFE VDIETFEEKP WRYQGVDITD YFNFGLNEET WIDYCRQLDQ RRIETTMQSR IRVYESGRTD QGYDPDLPPE LAAATGAQGV PVGSSDLVKV
0401: ETAQGDSAKV PAHVRPALPP GRPIPVETGS GERQPSVDTR APRMRDLDAI IEIVCQDSHE DAPSGENDTE PAVSSLPIEN VPVETGYVNS RRPDGESAER
0501: SPTQDEPRKR LLRKQDDEIS RSTGSGQSFR SSSPVGDRGT MSSSVDREDM GGVAGKDAEM EEERKTSSAV QEDDGGESKT ERSSGNSKAR SESHRDHQQL
0601: KDSAEQEVIQ NKHSTRPASS KKHHDNSAPY QSRKNQDRGK EMERTRAASK GGREYSNPHT DVDYSIARGD DYDRRKERDV DGGFWRRKED DPFSRRGGDE
0701: GFRKRDREED LGSKQRGKMR ESDIRNKDDH VPSRKHLDDG GLRNSYELDD HIGKRRKDEE YLRRNRSEKN EISYGQREST SRLKRERGDR LDHQKRDVQH
0801: KSRDDFDDHS SLRHRDDFYM QRDGNERLRE REDMDKLKLT QEDGLSARGR ERQVPTTRGH RGSEDRSSMM KDDYKASEKE HLTKDSTRHS KQTKRREYHG
0901: EESSHHRGHG DFSARTDETV NNEKMPRQEK TSAKSDNVIN SMDGQQLQDR KHKDSRRKIK EQREGADSAR SKQGEENGSS EVTGSKGKNE ARNHRSEIPQ
1001: QTNATKRHKE DASSGDELQD SKRGRTKMER WASHKERDDV VTVKASSTSS KLQDKEKGTN GRVLEPVHDK NRDLTEEKSS HDLAETKDRS EKGPPGDRHL
1101: DTVEKLKKRS ERFKLPMPTE KDTTVVKKME SETLPSAKIE GPVDSEVKAE RPARKRRWTS S
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.