Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37905 | Soybean | nucleus | 89.42 | 88.47 |
| VIT_11s0037g00130.t01 | Wine grape | nucleus | 51.61 | 45.66 |
| PGSC0003DMT400008250 | Potato | nucleus | 3.76 | 41.53 |
| CDX88655 | Canola | nucleus | 31.98 | 39.87 |
| Bra006786.1-P | Field mustard | nucleus | 31.98 | 39.83 |
| CDY43886 | Canola | nucleus | 35.2 | 39.53 |
| Solyc07g005320.2.1 | Tomato | nucleus | 41.72 | 39.42 |
| Bra002677.1-P | Field mustard | nucleus | 35.43 | 39.42 |
| AT5G58040.1 | Thale cress | nucleus | 35.51 | 38.71 |
| CDY11833 | Canola | nucleus | 31.14 | 38.12 |
| CDY70580 | Canola | cytosol, nucleus, plastid | 15.8 | 35.27 |
| TraesCS4B01G056200.1 | Wheat | nucleus | 30.14 | 34.69 |
| TraesCS4A01G258200.3 | Wheat | nucleus | 33.59 | 33.82 |
| GSMUA_Achr7P27630_001 | Banana | nucleus | 34.97 | 33.8 |
| HORVU4Hr1G009390.7 | Barley | nucleus | 32.59 | 33.28 |
| Zm00001d033843_P007 | Maize | nucleus | 32.36 | 33.2 |
| KXG37677 | Sorghum | nucleus | 32.75 | 33.15 |
| TraesCS4D01G056600.1 | Wheat | nucleus | 32.9 | 33.1 |
| Zm00001d013380_P001 | Maize | nucleus | 32.13 | 32.84 |
| GSMUA_Achr4P14570_001 | Banana | nucleus | 34.66 | 32.26 |
| KRH11949 | Soybean | nucleus | 13.88 | 16.48 |
| KRH36974 | Soybean | nucleus | 13.5 | 16.04 |
Protein Annotations
| EMBL:ACUP02009440 | EnsemblPlants:KRH12930 | EnsemblPlantsGene:GLYMA_15G205600 | EntrezGene:100799266 | InterPro:Fip1 | PANTHER:PTHR36884 |
| PFAM:PF05182 | ProteinID:KRH12930 | ProteinID:KRH12930.1 | SEG:seg | UniParc:UPI000295B0BA | UniProt:K7MD15 |
| MapMan:16.2.1.2.6 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:27798907..27808966
Molecular Weight (calculated)
146890.0 Da
IEP (calculated)
4.854
GRAVY (calculated)
-1.323
Length
1304 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDDDEFGDL YTDVLRPFAS SPSLSSAPQP HQPSPAPPSL DLSPNPDDAQ IPCDAPHANS PAPTNPLPEP DPREAPTEPP KIPDAKPTTD SNLAAAAVAV
0101: DPMDREVKFD IEEDEEDGGE PVIPGLTGEL AAPTEGEGDD WDSDSEDDLK IVLNENNHMA MERGGMADGD EEEEDGDEEL VIVAGGDPNQ GAEEPEWGEN
0201: ATLAAGDGER KDAAGELAKA GGAAVPPKIG YSNQGYHPFH SPFKYQYVRP GAALMPGAAA SAPGGPPGQI RPLANMAGRG RGDWRPPGIK GGAAMQKGFH
0301: AGPGLPGWGN GAAGRGFGGG LEFTLPSHKT IFDVDIENFE EKPWQYPNID TSDFFNFGLN EESWKDYCKQ LEQLRLESTM QSKIRVYESG RTEQEYDPDL
0401: PPELAAATGI HDSPVENTNS LKSDVGQSDV MKGSGTGRVR PPLPTGRAIQ VEGGYGDRLP SIDTRPPRIR DSDAIIEIVL QDTEDDQSSA GVAQDPPEGG
0501: EPHREDFRED HVAGDEIPRL EPEYFDGFPQ VYNGRKKEIA GRRMSFINSS AANMPNGDEK LFFPQEEPIE YSGSKGQNRR SYGGNCSSSH DERQMQRRVG
0601: GQSPSITPIQ ELATDNSLKE ESAESMEGRH RSSPAVKDIR ESSVEEKDIE LEDTGTADGS SRLEKEETVD KVDALEDGVA KRQKLTSRVE PPLLDEVDDW
0701: EDSKAAKSSD NSKARSASSR DNQKRREGFE EEVVQDPRSA QLSSIRQHPD EIEQGFYRRE HDAKQEPGRN LMMLKGRERP YPYKDRHPSS ATQLNTNADG
0801: FDGQKERDNS EMDWSRRDDD LYNRRVRNDE PRKRDRAKVR ENEKNDKEDS LHSRKQLDNG SYRVSYEKDV GSRDSRQRER DEGLRIRYEA VEDYRGKKRK
0901: DEEYLRREHI DKEEVLHGYR EIASSRRRRE RDEVLDPRKR DDLQRARDNP DDQYATRQKD EAWVLKERGD RQRDREEWCR MKQSHEEHLP KREREGRSSV
1001: RSGRGAEHKL SEKEYQSREA MRHNDQLKRR DRIQDESPHH KGRDDASARG NQYTTEERRS RLERSSSRSD RVANVSDNQK VKHREGSRKS KERDVSDLNS
1101: LGLSKRSQEN QSGPTNEKGL KGSGDEERAE HEISGHRLSR KQREDMSSDD EQQDSRRGRS KLERWTSHKE RDFNVNKSSS SLKFKDIDKD NNDASSEAGK
1201: PAYEPAKTVD ADNQHILSVE ARDSADMENR DADTKESGDR HLDTVERLKK RSERFKLPMP SEKEALVIKK LESEPLPSAK SENPVVDSEV KQERPARKRR
1301: WVTN
0101: DPMDREVKFD IEEDEEDGGE PVIPGLTGEL AAPTEGEGDD WDSDSEDDLK IVLNENNHMA MERGGMADGD EEEEDGDEEL VIVAGGDPNQ GAEEPEWGEN
0201: ATLAAGDGER KDAAGELAKA GGAAVPPKIG YSNQGYHPFH SPFKYQYVRP GAALMPGAAA SAPGGPPGQI RPLANMAGRG RGDWRPPGIK GGAAMQKGFH
0301: AGPGLPGWGN GAAGRGFGGG LEFTLPSHKT IFDVDIENFE EKPWQYPNID TSDFFNFGLN EESWKDYCKQ LEQLRLESTM QSKIRVYESG RTEQEYDPDL
0401: PPELAAATGI HDSPVENTNS LKSDVGQSDV MKGSGTGRVR PPLPTGRAIQ VEGGYGDRLP SIDTRPPRIR DSDAIIEIVL QDTEDDQSSA GVAQDPPEGG
0501: EPHREDFRED HVAGDEIPRL EPEYFDGFPQ VYNGRKKEIA GRRMSFINSS AANMPNGDEK LFFPQEEPIE YSGSKGQNRR SYGGNCSSSH DERQMQRRVG
0601: GQSPSITPIQ ELATDNSLKE ESAESMEGRH RSSPAVKDIR ESSVEEKDIE LEDTGTADGS SRLEKEETVD KVDALEDGVA KRQKLTSRVE PPLLDEVDDW
0701: EDSKAAKSSD NSKARSASSR DNQKRREGFE EEVVQDPRSA QLSSIRQHPD EIEQGFYRRE HDAKQEPGRN LMMLKGRERP YPYKDRHPSS ATQLNTNADG
0801: FDGQKERDNS EMDWSRRDDD LYNRRVRNDE PRKRDRAKVR ENEKNDKEDS LHSRKQLDNG SYRVSYEKDV GSRDSRQRER DEGLRIRYEA VEDYRGKKRK
0901: DEEYLRREHI DKEEVLHGYR EIASSRRRRE RDEVLDPRKR DDLQRARDNP DDQYATRQKD EAWVLKERGD RQRDREEWCR MKQSHEEHLP KREREGRSSV
1001: RSGRGAEHKL SEKEYQSREA MRHNDQLKRR DRIQDESPHH KGRDDASARG NQYTTEERRS RLERSSSRSD RVANVSDNQK VKHREGSRKS KERDVSDLNS
1101: LGLSKRSQEN QSGPTNEKGL KGSGDEERAE HEISGHRLSR KQREDMSSDD EQQDSRRGRS KLERWTSHKE RDFNVNKSSS SLKFKDIDKD NNDASSEAGK
1201: PAYEPAKTVD ADNQHILSVE ARDSADMENR DADTKESGDR HLDTVERLKK RSERFKLPMP SEKEALVIKK LESEPLPSAK SENPVVDSEV KQERPARKRR
1301: WVTN
0001: MEEDDEFGDL YSDVLQPFQP PVVLPPPPPL PHRSIDLNLR SQDQDVSEPN SAPISRVSDN DAVKLSTQDA TRQAIVDGGG DDKDMSFDIE EPDADSTPTI
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
0101: PGLFVTGALP GLATDRGVSQ VTTRIEQQVG GGGDGGYGGQ GEGDDWDSDS EDDLQIVLND SSRNVMIGGA DRRSRMGDNE DDDDEDDEDP LVIVADTDPN
0201: QPMEEQMWGE DGLQGIEGDG KDGGEAGKGS GPGGATGPPK AGYSSHGYHP FHSQFKYVRP GAAPIPGGAA SVGGPSSGQV RPPANLGPMA GRGRGDWRPL
0301: GMRNASAAQK GFHQPWGSNT AGRGLDFTLP SHKTIFEVDI DSFEEKPWRY PGVEMTDYFN FGLNEESWKD YCKQLDQHRI QTTMQSRIRV YESGRTDQGY
0401: DPDLPPELAA ATGAQGVPVD SSNLVKPDSV QGDSAKVPAN VRPTLPPGRP IPVETGSGER LPSIDTRAPR MRDLDAIIEI VCQDSHEDEP SGENGTDQAD
0501: SSLPGENVPV ETSYVNNKRP DTESAEHSPA QDEPHKNLLK KQDDEISRST DSGQSFRSSS PVGDRGTRSS SVDREDVGGE AGKDAEMGEE LKMSFTSPQS
0601: AVQEDDGGES KTERSSESSK ARSGSHRDFQ QEEDVIQDKH SSRPANNRKQ YDNNAPHQSR KNQDRGKEME RTRAASKGGR ENSNPHMELD STYIYSIASR
0701: EDFDKRKERD VDGAVWRRKE DDPYSRRGGD EGSRKRDRED DPGFRQRGKM RENEIRSKDD QVPSRKHMDD AGMRNIYEPD DHINKRRKDE EYLRRSRPEK
0801: NEISYGQRES MSRVKRERDD RLEHQKRDVQ HKIRDDFDDH GSLRQRDDIY MQRDGNERLR ERDVLDKLKL PHEDGISARG RERQVAVRGH RGSEDRSSRM
0901: KDEYKASDKE HVTKDTLRHA KQTKRRDYPG EESSSHHRGH EDFSARTDNI VNNEKKPRQE RTGAKIDKFI DTLDGQRLQD RKHKDSRRKI KEQREGTESL
1001: SKQGEQNGSS VVTGSKGTND ARNCRSEIPH QPNTAKRHKE NASSGDEIHD SKRGRTKLER WASHKEREDA VSAKSSSISS KLEEKENNTN GRLSEPVHGS
1101: IGKSRDVTEE KIGHDLADTK DGSEKGPGDR HLDTVEKLKK RSERFKLPMP TEKDTTGVKK MESETLPSAK IEGPVDSEVK AERPARKRRW TSS
Arabidopsis Description
FIPS5FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.