Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g008630.2.1 | Tomato | plastid | 95.19 | 95.9 |
| GSMUA_Achr3P12260_001 | Banana | cytosol | 63.7 | 79.63 |
| CDY08324 | Canola | cytosol | 58.15 | 77.72 |
| CDY25531 | Canola | mitochondrion | 70.74 | 75.79 |
| KRH17565 | Soybean | mitochondrion, plastid | 74.44 | 75.56 |
| CDY34380 | Canola | mitochondrion | 70.0 | 75.0 |
| Bra027662.1-P | Field mustard | mitochondrion | 69.26 | 74.21 |
| KRH70396 | Soybean | plastid | 74.07 | 74.07 |
| CDY38220 | Canola | plastid | 68.89 | 73.81 |
| Bra027784.1-P | Field mustard | mitochondrion, plastid | 68.89 | 73.81 |
| AT1G64680.1 | Thale cress | mitochondrion, plastid | 67.78 | 73.2 |
| VIT_02s0025g02640.t01 | Wine grape | plastid | 70.0 | 71.05 |
| TraesCS7D01G314600.1 | Wheat | plastid | 64.07 | 65.53 |
| Os08t0114100-01 | Rice | plastid | 63.33 | 65.52 |
| TraesCS7A01G317900.1 | Wheat | plastid | 63.7 | 65.15 |
| TraesCSU01G097100.1 | Wheat | plastid | 62.96 | 65.13 |
| KXG24264 | Sorghum | plastid | 64.07 | 64.31 |
| Zm00001d045816_P001 | Maize | mitochondrion | 30.0 | 62.31 |
| HORVU7Hr1G076030.6 | Barley | plastid | 62.59 | 57.48 |
| Zm00001d035081_P001 | Maize | plastid | 61.11 | 54.1 |
| PGSC0003DMT400049687 | Potato | extracellular | 16.3 | 36.36 |
| PGSC0003DMT400061819 | Potato | plastid | 28.15 | 30.28 |
| PGSC0003DMT400061815 | Potato | cytosol | 18.52 | 25.25 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400015016 | EnsemblPlantsGene:PGSC0003DMG402005859 | EntrezGene:102602280 | InterPro:D27-like | InterPro:DUF4033 | KEGG:00906+5.2.1.14 |
| PANTHER:PTHR33591 | PANTHER:PTHR33591:SF1 | PFAM:PF13225 | PGSC:PGSC0003DMG402005859 | RefSeq:XP_006352216.1 | SEG:seg |
| UniParc:UPI00029585FB | UniProt:M1A598 | MapMan:35.1 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402005859]
Coordinates
chr8:-:5526694..5528435
Molecular Weight (calculated)
30390.4 Da
IEP (calculated)
7.905
GRAVY (calculated)
-0.333
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLSIPYSS PSFNNYTTFY HSQSQSQSQS RYVKIGIRCG IAEPSGEPAP LGQKTKYNDG LFEKAFMTLF ARKMENFGAS KKESDQKKRG FFDYDYDSFV
101: DVSRKVMQGR SRLQQQQVVR EVLMSMLPPG APAQFRKLFP PTQWAAEFNA AITVPFFFWL VGPSEVVEVE VDGVKQKSGV HIKKCRYLEN SGCVGMCVNM
201: CKIPTQDFFT NEFGLPLTMN PNFEDMSCEM IYGQVPPPFE EDPVSKQPCY ASICTIANPS SNVCPKLSAN
101: DVSRKVMQGR SRLQQQQVVR EVLMSMLPPG APAQFRKLFP PTQWAAEFNA AITVPFFFWL VGPSEVVEVE VDGVKQKSGV HIKKCRYLEN SGCVGMCVNM
201: CKIPTQDFFT NEFGLPLTMN PNFEDMSCEM IYGQVPPPFE EDPVSKQPCY ASICTIANPS SNVCPKLSAN
001: MAAIASLQAV NLTFRRRSTR CGIAEPSGEP APMGLKTRYE DGLVERVFMG LFARKMDKFG SKKKKDTKEK GFWEYDYESF VEVSKRVMQG RSRVQQQEAV
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
Arabidopsis Description
At1g64680 [Source:UniProtKB/TrEMBL;Acc:Q9SGU7]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.