Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70396 | Soybean | plastid | 91.35 | 90.0 |
| GSMUA_Achr3P12260_001 | Banana | cytosol | 65.79 | 81.02 |
| CDY08324 | Canola | cytosol | 58.65 | 77.23 |
| Solyc08g008630.2.1 | Tomato | plastid | 75.94 | 75.37 |
| CDY25531 | Canola | mitochondrion | 70.68 | 74.6 |
| CDY34380 | Canola | mitochondrion | 70.68 | 74.6 |
| PGSC0003DMT400015016 | Potato | plastid | 75.56 | 74.44 |
| VIT_02s0025g02640.t01 | Wine grape | plastid | 74.06 | 74.06 |
| Bra027662.1-P | Field mustard | mitochondrion | 69.92 | 73.81 |
| CDY38220 | Canola | plastid | 69.92 | 73.81 |
| Bra027784.1-P | Field mustard | mitochondrion, plastid | 69.92 | 73.81 |
| AT1G64680.1 | Thale cress | mitochondrion, plastid | 69.17 | 73.6 |
| Os08t0114100-01 | Rice | plastid | 65.04 | 66.28 |
| TraesCS7A01G317900.1 | Wheat | plastid | 65.04 | 65.53 |
| TraesCS7D01G314600.1 | Wheat | plastid | 65.04 | 65.53 |
| TraesCSU01G097100.1 | Wheat | plastid | 64.29 | 65.52 |
| KXG24264 | Sorghum | plastid | 65.79 | 65.06 |
| Zm00001d045816_P001 | Maize | mitochondrion | 29.7 | 60.77 |
| HORVU7Hr1G076030.6 | Barley | plastid | 63.91 | 57.82 |
| Zm00001d035081_P001 | Maize | plastid | 63.91 | 55.74 |
| KRH32085 | Soybean | mitochondrion, plastid | 32.71 | 33.98 |
| KRH71353 | Soybean | cytosol | 31.2 | 33.33 |
| KRH69204 | Soybean | plastid | 30.08 | 30.3 |
| KRH31781 | Soybean | plastid | 27.82 | 27.21 |
Protein Annotations
| EMBL:ACUP02007817 | EnsemblPlants:KRH17565 | EnsemblPlantsGene:GLYMA_13G001100 | EntrezGene:100780474 | InterPro:D27-like | InterPro:DUF4033 |
| KEGG:00906+5.2.1.14 | MetaCyc:PWY-7101 | PANTHER:PTHR33591 | PANTHER:PTHR33591:SF1 | PFAM:PF13225 | ProteinID:KRH17565 |
| ProteinID:KRH17565.1 | SEG:seg | UniParc:UPI000233B660 | UniProt:I1LXH9 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr13:-:372412..376123
Molecular Weight (calculated)
29689.8 Da
IEP (calculated)
8.253
GRAVY (calculated)
-0.328
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MVALSFQGGR ASPAQPQHPS LCSGRAAGVI RIRCGIAEPS GEPAPLGQKT RYHDGIFEKA FMTLFARKME KFSDPPAGKA RENKGWWDWG YDYESFVDVS
101: RRVMQRRSRI QQQQVVREVL LSMLPPGAPA QFRKLFPPTK WAAEFNAALT VPFFDWLVGP SEVVEVEING VKQKSGVHIK KCRYLENSGC VGMCVNMCKI
201: PTQDFFTNEF GLPLTMTPNF EDMSCDMVYG QSPPTFEEDP VSKQPCYADI CSMAKPSSSV CPKLQA
101: RRVMQRRSRI QQQQVVREVL LSMLPPGAPA QFRKLFPPTK WAAEFNAALT VPFFDWLVGP SEVVEVEING VKQKSGVHIK KCRYLENSGC VGMCVNMCKI
201: PTQDFFTNEF GLPLTMTPNF EDMSCDMVYG QSPPTFEEDP VSKQPCYADI CSMAKPSSSV CPKLQA
001: MAAIASLQAV NLTFRRRSTR CGIAEPSGEP APMGLKTRYE DGLVERVFMG LFARKMDKFG SKKKKDTKEK GFWEYDYESF VEVSKRVMQG RSRVQQQEAV
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
Arabidopsis Description
At1g64680 [Source:UniProtKB/TrEMBL;Acc:Q9SGU7]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.