Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027784.1-P | Field mustard | mitochondrion, plastid | 99.6 | 99.6 |
| CDY25531 | Canola | mitochondrion | 94.44 | 94.44 |
| CDY08324 | Canola | cytosol | 75.4 | 94.06 |
| CDY34380 | Canola | mitochondrion | 94.05 | 94.05 |
| AT1G64680.1 | Thale cress | mitochondrion, plastid | 89.68 | 90.4 |
| GSMUA_Achr3P12260_001 | Banana | cytosol | 68.25 | 79.63 |
| VIT_02s0025g02640.t01 | Wine grape | plastid | 74.21 | 70.3 |
| KRH17565 | Soybean | mitochondrion, plastid | 73.81 | 69.92 |
| Solyc08g008630.2.1 | Tomato | plastid | 73.41 | 69.03 |
| PGSC0003DMT400015016 | Potato | plastid | 73.81 | 68.89 |
| KRH70396 | Soybean | plastid | 73.41 | 68.52 |
| Os08t0114100-01 | Rice | plastid | 69.44 | 67.05 |
| TraesCS7A01G317900.1 | Wheat | plastid | 68.25 | 65.15 |
| TraesCSU01G097100.1 | Wheat | plastid | 67.46 | 65.13 |
| KXG24264 | Sorghum | plastid | 69.44 | 65.06 |
| TraesCS7D01G314600.1 | Wheat | plastid | 67.86 | 64.77 |
| Zm00001d045816_P001 | Maize | mitochondrion | 32.14 | 62.31 |
| HORVU7Hr1G076030.6 | Barley | plastid | 66.67 | 57.14 |
| Zm00001d035081_P001 | Maize | plastid | 66.27 | 54.75 |
| CDY32495 | Canola | mitochondrion, plastid | 33.33 | 31.82 |
| CDY37443 | Canola | mitochondrion | 33.33 | 31.58 |
| CDX90961 | Canola | plastid | 29.76 | 29.3 |
| CDX91821 | Canola | plastid | 29.76 | 28.96 |
Protein Annotations
| EnsemblPlants:CDY38220 | EnsemblPlantsGene:GSBRNA2T00065548001 | InterPro:D27-like | InterPro:DUF4033 | KEGG:00906+5.2.1.14 | MetaCyc:PWY-7101 |
| PANTHER:PTHR33591 | PANTHER:PTHR33591:SF1 | PFAM:PF13225 | ProteinID:CDY38220 | ProteinID:CDY38220.1 | UniParc:UPI0004EDDD7E |
| UniProt:A0A078HIB2 | MapMan:35.1 | : | : | : | : |
Description
BnaA09g11690DBnaA09g11690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIB2]
Coordinates
chrLK032418:-:293491..294812
Molecular Weight (calculated)
28219.1 Da
IEP (calculated)
8.318
GRAVY (calculated)
-0.352
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAIASLQAI HLNFGRRGSI RCGISEPSGE PAPVGQKTRY NDGLAERVFM GLFARKMDKF GGSKKKNEMK EKGFWDYDYE SFVEVSKRVM QGRSRTQQQE
101: VVREVLLSML PPGAPEQFRK LFPPTKWAAE FNAALTVPFF HWLVGPSQVI EVEVNGVKQR SGVRIKKCRY LENSGCVGMC VNMCKIPTQD FFTNEFGLPL
201: TMNPNFDDMS CEMIYGQAPP AFEDDPATRQ PCLADICSMS NPSSPVCPKL HA
101: VVREVLLSML PPGAPEQFRK LFPPTKWAAE FNAALTVPFF HWLVGPSQVI EVEVNGVKQR SGVRIKKCRY LENSGCVGMC VNMCKIPTQD FFTNEFGLPL
201: TMNPNFDDMS CEMIYGQAPP AFEDDPATRQ PCLADICSMS NPSSPVCPKL HA
001: MAAIASLQAV NLTFRRRSTR CGIAEPSGEP APMGLKTRYE DGLVERVFMG LFARKMDKFG SKKKKDTKEK GFWEYDYESF VEVSKRVMQG RSRVQQQEAV
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
Arabidopsis Description
At1g64680 [Source:UniProtKB/TrEMBL;Acc:Q9SGU7]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.