Factsheet for VIT_02s0025g02640.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P12260_001	Banana	cytosol	66.17	81.48
CDY34380	Canola	mitochondrion	71.8	75.79
Bra027662.1-P	Field mustard	mitochondrion	71.43	75.4
CDY25531	Canola	mitochondrion	71.43	75.4
CDY08324	Canola	cytosol	57.14	75.25
KRH70396	Soybean	plastid	75.94	74.81
AT1G64680.1	Thale cress	mitochondrion, plastid	70.3	74.8
Bra027784.1-P	Field mustard	mitochondrion, plastid	70.3	74.21
CDY38220	Canola	plastid	70.3	74.21
KRH17565	Soybean	mitochondrion, plastid	74.06	74.06
Solyc08g008630.2.1	Tomato	plastid	71.05	70.52
PGSC0003DMT400015016	Potato	plastid	71.05	70.0
TraesCSU01G097100.1	Wheat	plastid	66.17	67.43
TraesCS7A01G317900.1	Wheat	plastid	65.79	66.29
TraesCS7D01G314600.1	Wheat	plastid	65.41	65.91
Os08t0114100-01	Rice	plastid	64.29	65.52
KXG24264	Sorghum	plastid	65.41	64.68
Zm00001d045816_P001	Maize	mitochondrion	29.7	60.77
HORVU7Hr1G076030.6	Barley	plastid	65.04	58.84
Zm00001d035081_P001	Maize	plastid	62.41	54.43
VIT_00s0179g00330.t01	Wine grape	mitochondrion, plastid	31.58	34.01
VIT_07s0005g01610.t01	Wine grape	plastid	27.82	28.35

Protein Annotations

ArrayExpress:VIT_02s0025g02640	EMBL:FN596251	EnsemblPlants:VIT_02s0025g02640.t01	EnsemblPlantsGene:VIT_02s0025g02640	EntrezGene:100256431	EntrezGene:LOC100256431
InterPro:D27-like	InterPro:DUF4033	KEGG:00906+5.2.1.14	PANTHER:PTHR33591	PANTHER:PTHR33591:SF1	PFAM:PF13225
ProteinID:CCB58299	ProteinID:CCB58299.1	RefSeq:XP_002279815	RefSeq:XP_002279815.1	TIGR:TC65261	unigene:Vvi.9577
UniParc:UPI00015CC95A	UniProt:F6HU76	wikigene:100256431	wikigene:LOC100256431	MapMan:35.1	:

Description

No Description!

Coordinates

chr2:+:2309835..2311836

Molecular Weight (calculated)

30117.4 Da

IEP (calculated)

8.253

GRAVY (calculated)

-0.269

Length

266 amino acids

Sequence
(BLAST)

001: MSVLSFQAVQ FPALDHRSLP RRRSSTGYIN IVRCGIAEPS GEPAPFGQKT RYNDGFFEKV FMTLFARKMG RFAAPAKSGI EAEKKRSWWD CDYERFVDVS
101: KRVMQGRSRM QQQEVVREVL LSMLPPGAPD QFRKLFPPTR WAAEFNAAFT VPFFAWLVGP SEVVEVEVNG VKQRSGVLIK KCRYLENSGC VGMCVNMCKI
201: PTQDFFTNEF GLPLTMTPNF EDMSCEMVYG QVPPPFEEDP VSKQPCFSDI CSMANPNSSI CHKLQA

Best Arabidopsis Sequence Match ( AT1G64680.1 )
(BLAST)

001: MAAIASLQAV NLTFRRRSTR CGIAEPSGEP APMGLKTRYE DGLVERVFMG LFARKMDKFG SKKKKDTKEK GFWEYDYESF VEVSKRVMQG RSRVQQQEAV
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA

Arabidopsis Description

At1g64680 [Source:UniProtKB/TrEMBL;Acc:Q9SGU7]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.