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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • nucleus 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400061819 Potato plastid 62.84 65.34
Solyc06g084610.2.1 Tomato plastid 61.3 63.74
KRH69204 Soybean plastid 62.07 61.36
KRH31781 Soybean plastid 62.07 59.56
PGSC0003DMT400061815 Potato cytosol 43.3 57.07
EES18959 Sorghum plastid 59.77 56.32
Zm00001d024718_P004 Maize plastid 59.0 55.6
TraesCS1A01G073000.2 Wheat mitochondrion, plastid 58.24 55.27
TraesCS1B01G092200.1 Wheat plastid 58.24 55.27
TraesCS1D01G075900.1 Wheat plastid 57.47 54.55
CDX91821 Canola plastid 54.02 54.44
AT4G01995.1 Thale cress plastid 53.64 54.26
CDX90961 Canola plastid 52.49 53.52
Bra000901.1-P Field mustard plastid 52.49 53.52
Os05t0131100-01 Rice plastid 54.79 52.96
HORVU1Hr1G015940.3 Barley plastid 56.32 47.88
TraesCS1B01G092300.1 Wheat plastid 31.8 47.16
Os05t0131401-00 Rice plastid 27.2 39.66
VIT_02s0025g02640.t01 Wine grape plastid 28.35 27.82
VIT_00s0179g00330.t01 Wine grape mitochondrion, plastid 25.29 26.72
Protein Annotations
ArrayExpress:VIT_07s0005g01610EMBL:FN596502EnsemblPlants:VIT_07s0005g01610.t01EnsemblPlantsGene:VIT_07s0005g01610EntrezGene:100253777EntrezGene:LOC100253777
InterPro:D27-likeInterPro:DUF4033KEGG:00906+5.2.1.14PANTHER:PTHR33591PANTHER:PTHR33591:SF2PFAM:PF13225
ProteinID:CBI36963ProteinID:CBI36963.3RefSeq:XP_002271003RefSeq:XP_002271003.1unigene:Vvi.5078UniParc:UPI0001983B49
UniProt:D7U2J7wikigene:100253777wikigene:LOC100253777MapMan:35.1::
Description
No Description!
Coordinates
chr7:-:4100048..4104802
Molecular Weight (calculated)
28971.3 Da
IEP (calculated)
8.188
GRAVY (calculated)
-0.097
Length
261 amino acids
Sequence
(BLAST)
001: MNSLVFLRPL TFSPSPPQSK LSVKNPSFRI SFSSAQSNAV EAGEYKPGVF DDLFLNLFRS RMVKEVGWDS EKPGYDGLID VANQLMMKSK SNSKVKEAAV
101: RILISLFPPF LLDLYRMLVA PIGGGKVAAM MVARVTALSC QWLMGPCTVN SVNLPDGSSC SSGVFVERCK YLEESKCVGI CINTCKLPTQ TFFKDYMGVP
201: LAMEPDFTNY SCQFSFGVLP PRPEEDSTLK EPCLEICPNA TRRKEINRNM DNKELVQCPK A
Best Arabidopsis Sequence Match ( AT4G01995.1 )
(BLAST)
001: MAVLIQVLLP PPTTIVFSNS FSTKLILTRR LRCRISNSSE VKSDEGAPKL EYKPGPLDDF FMQSFRNKLV EEVGSDSEKP GYVGLIELVK LLLLKGRTRS
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA
Arabidopsis Description
Beta-carotene isomerase D27 [Source:UniProtKB/TrEMBL;Acc:Q8W4C4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.