Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000901.1-P | Field mustard | plastid | 89.96 | 91.02 |
| CDX90961 | Canola | plastid | 89.58 | 90.62 |
| AT4G01995.1 | Thale cress | plastid | 77.61 | 77.91 |
| PGSC0003DMT400061819 | Potato | plastid | 55.6 | 57.37 |
| Solyc06g084610.2.1 | Tomato | plastid | 54.83 | 56.57 |
| KRH69204 | Soybean | plastid | 56.76 | 55.68 |
| VIT_07s0005g01610.t01 | Wine grape | plastid | 54.44 | 54.02 |
| KRH31781 | Soybean | plastid | 55.21 | 52.57 |
| PGSC0003DMT400061815 | Potato | cytosol | 39.77 | 52.02 |
| Os05t0131100-01 | Rice | plastid | 51.35 | 49.26 |
| EES18959 | Sorghum | plastid | 52.51 | 49.1 |
| TraesCS1D01G075900.1 | Wheat | plastid | 52.12 | 49.09 |
| TraesCS1A01G073000.2 | Wheat | mitochondrion, plastid | 51.74 | 48.73 |
| TraesCS1B01G092200.1 | Wheat | plastid | 51.35 | 48.36 |
| Zm00001d024718_P004 | Maize | plastid | 50.97 | 47.65 |
| TraesCS1B01G092300.1 | Wheat | plastid | 28.57 | 42.05 |
| HORVU1Hr1G015940.3 | Barley | plastid | 49.81 | 42.02 |
| Os05t0131401-00 | Rice | plastid | 25.48 | 36.87 |
| CDY08324 | Canola | cytosol | 25.48 | 32.67 |
| CDY25531 | Canola | mitochondrion | 29.73 | 30.56 |
| CDY34380 | Canola | mitochondrion | 29.34 | 30.16 |
| CDY38220 | Canola | plastid | 28.96 | 29.76 |
| CDY37443 | Canola | mitochondrion | 26.25 | 25.56 |
| CDY32495 | Canola | mitochondrion, plastid | 25.48 | 25.0 |
Protein Annotations
| EnsemblPlants:CDX91821 | EnsemblPlantsGene:GSBRNA2T00153421001 | InterPro:D27-like | InterPro:DUF4033 | KEGG:00906+5.2.1.14 | MetaCyc:PWY-7101 |
| PANTHER:PTHR33591 | PANTHER:PTHR33591:SF2 | PFAM:PF13225 | ProteinID:CDX91821 | ProteinID:CDX91821.1 | SEG:seg |
| UniParc:UPI0004EEF21A | MapMan:35.1 | : | : | : | : |
Description
BnaC03g31230D
Coordinates
chrLK031870:-:101142..102976
Molecular Weight (calculated)
28737.0 Da
IEP (calculated)
7.061
GRAVY (calculated)
-0.063
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MTILLLHVPP PTTIGFSCSS SPRSTTQTLN LTRRVRCHIS NSTEVEGSSK SEYKPGVLDD FFMQSFRNKL VEEVGSDSDK PGYVGLIELV KLLLLKSRSR
101: SESNDAAVRI LKSLFPPLIL ELYKLLIAPL AQGKIAALMV ARVTVLTCQW LMGPCKVNTI ELPNGESWES GVFVEKCQYL EESKCVGVCI NTCKLPTQTF
201: FKDYMGVPLL MEPDFKDYSC QFKFGVAPPE DDGSVNEPCF EKCSIASRRK LNSGECPMA
101: SESNDAAVRI LKSLFPPLIL ELYKLLIAPL AQGKIAALMV ARVTVLTCQW LMGPCKVNTI ELPNGESWES GVFVEKCQYL EESKCVGVCI NTCKLPTQTF
201: FKDYMGVPLL MEPDFKDYSC QFKFGVAPPE DDGSVNEPCF EKCSIASRRK LNSGECPMA
001: MAVLIQVLLP PPTTIVFSNS FSTKLILTRR LRCRISNSSE VKSDEGAPKL EYKPGPLDDF FMQSFRNKLV EEVGSDSEKP GYVGLIELVK LLLLKGRTRS
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA
Arabidopsis Description
Beta-carotene isomerase D27 [Source:UniProtKB/TrEMBL;Acc:Q8W4C4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.