CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69204	Soybean	plastid	76.1	78.41
VIT_07s0005g01610.t01	Wine grape	plastid	59.56	62.07
PGSC0003DMT400061819	Potato	plastid	56.62	61.35
Solyc06g084610.2.1	Tomato	plastid	56.25	60.96
CDX90961	Canola	plastid	52.94	56.25
PGSC0003DMT400061815	Potato	cytosol	40.81	56.06
Bra000901.1-P	Field mustard	plastid	52.57	55.86
AT4G01995.1	Thale cress	plastid	52.94	55.81
CDX91821	Canola	plastid	52.57	55.21
TraesCS1B01G092200.1	Wheat	plastid	54.41	53.82
EES18959	Sorghum	plastid	54.04	53.07
TraesCS1A01G073000.2	Wheat	mitochondrion, plastid	53.31	52.73
Zm00001d024718_P004	Maize	plastid	53.68	52.71
TraesCS1D01G075900.1	Wheat	plastid	52.57	52.0
Os05t0131100-01	Rice	plastid	50.74	51.11
HORVU1Hr1G015940.3	Barley	plastid	52.94	46.91
TraesCS1B01G092300.1	Wheat	plastid	28.31	43.75
Os05t0131401-00	Rice	plastid	26.84	40.78
KRH17565	Soybean	mitochondrion, plastid	27.21	27.82
KRH70396	Soybean	plastid	27.21	27.41
KRH71353	Soybean	cytosol	22.06	24.1
KRH32085	Soybean	mitochondrion, plastid	22.06	23.44

Protein Annotations

EMBL:ACUP02006086	EnsemblPlants:KRH31781	EnsemblPlantsGene:GLYMA_10G011900	InterPro:D27-like	InterPro:DUF4033	KEGG:00906+5.2.1.14
MetaCyc:PWY-7101	PANTHER:PTHR33591	PANTHER:PTHR33591:SF2	PFAM:PF13225	ProteinID:KRH31781	ProteinID:KRH31781.1
SEG:seg	UniParc:UPI0002963381	UniProt:I1L7N6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr10:+:1103401..1106231

Molecular Weight (calculated)

29646.4 Da

IEP (calculated)

8.783

GRAVY (calculated)

-0.019

Length

272 amino acids

Sequence
(BLAST)

001: MGTVGEKMKA LGAVGGGGAP VPVVCSSVRN HRFRVSFSSS SPSPGPKTVE QVGIGALKSD YKPGVFDDLF LKLFRNKLVQ EVGWDSKKAG YDGLIEVANR
101: LMMKGTTNSD TVEAAVRILR SLFPPYLLEL YKMLIAPIGG GKIAAMMVAR VTVLTCQWLM GPCKVNSVDL PDGTSCSSGV YVERCKYLEE SKCVGICTHT
201: CKFPTQTFFK DHMGVPLLME PNFADYSCQF KFGVLPPRDD TIVKEPCLEA CPNAKQRRMV ARNIDITACP KT

Best Arabidopsis Sequence Match ( AT4G01995.1 )
(BLAST)

001: MAVLIQVLLP PPTTIVFSNS FSTKLILTRR LRCRISNSSE VKSDEGAPKL EYKPGPLDDF FMQSFRNKLV EEVGSDSEKP GYVGLIELVK LLLLKGRTRS
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA

Arabidopsis Description

Beta-carotene isomerase D27 [Source:UniProtKB/TrEMBL;Acc:Q8W4C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.