CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71353	Soybean	cytosol	87.11	89.56
VIT_00s0179g00330.t01	Wine grape	mitochondrion, plastid	57.03	59.11
PGSC0003DMT400049687	Potato	extracellular	25.39	53.72
GSMUA_Achr1P14050_001	Banana	mitochondrion	46.88	49.18
Zm00001d007549_P003	Maize	plastid	50.78	47.62
Os11t0587000-01	Rice	plastid	51.56	47.48
Zm00001d007560_P004	Maize	plastid	50.78	47.27
TraesCS7A01G418900.1	Wheat	plastid	50.78	46.76
TraesCS7B01G319100.1	Wheat	plastid	50.39	46.24
HORVU7Hr1G096970.10	Barley	plastid	49.61	46.01
Solyc09g065750.2.1	Tomato	cytosol	52.34	45.89
TraesCS7D01G411500.1	Wheat	plastid	50.0	45.71
GSMUA_Achr2P08930_001	Banana	mitochondrion, plastid	48.44	44.44
CDY32495	Canola	mitochondrion, plastid	45.7	44.32
Bra032560.1-P	Field mustard	mitochondrion, plastid	45.7	43.98
CDY37443	Canola	mitochondrion	44.92	43.23
AT1G03055.1	Thale cress	plastid	44.53	43.18
KXG28800	Sorghum	plastid	48.83	42.81
KRH17565	Soybean	mitochondrion, plastid	33.98	32.71
KRH70396	Soybean	plastid	33.59	31.85
KRH69204	Soybean	plastid	24.61	23.86
KRH31781	Soybean	plastid	23.44	22.06

Protein Annotations

EMBL:ACUP02006095	EnsemblPlants:KRH32085	EnsemblPlantsGene:GLYMA_10G031100	InterPro:D27-like	InterPro:DUF4033	KEGG:00906+5.2.1.14
MetaCyc:PWY-7101	PANTHER:PTHR33591	PANTHER:PTHR33591:SF3	PFAM:PF13225	ProteinID:KRH32084.1	ProteinID:KRH32085
ProteinID:KRH32085.1	SEG:seg	UniParc:UPI000295C6CF	UniProt:K7LH46	MapMan:11.9.1.1	:

Description

hypothetical protein

Coordinates

chr10:-:2704921..2710721

Molecular Weight (calculated)

28732.2 Da

IEP (calculated)

9.418

GRAVY (calculated)

-0.189

Length

256 amino acids

Sequence
(BLAST)

001: MEAKLVAQCK SPTLSLAHRK PKHPCVVVGV LARPVDEISG EARKTNHVYK DGLFDRITIN YLSKCVQEAT GLRNNKSGYE SLVDAATVAS QRFSPVEQHQ
101: LVIQSLDRAF PKPMLLLIRK LLPPSKFARK LFAVFTTLFF AWLVGPSEVR ESEVEGRRER NVVHIKKCRW GRLPRFLEGT NCVGMCINLC KLPSQSFIKD
201: SLGISVNMVP NFDDMSCEMI FGQDPPESTD DPALKQPCFK LCKAKRSHGT NCLVIN

Best Arabidopsis Sequence Match ( AT1G03055.1 )
(BLAST)

001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH

Arabidopsis Description

D27Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.