Factsheet for Solyc09g065750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049687	Potato	extracellular	28.42	68.59
VIT_00s0179g00330.t01	Wine grape	mitochondrion, plastid	49.32	58.3
KRH71353	Soybean	cytosol	45.55	53.41
KRH32085	Soybean	mitochondrion, plastid	45.89	52.34
GSMUA_Achr1P14050_001	Banana	mitochondrion	41.78	50.0
GSMUA_Achr2P08930_001	Banana	mitochondrion, plastid	41.1	43.01
Zm00001d007549_P003	Maize	plastid	40.07	42.86
Zm00001d007560_P004	Maize	plastid	40.07	42.55
Os11t0587000-01	Rice	plastid	40.41	42.45
TraesCS7A01G418900.1	Wheat	plastid	39.73	41.73
CDY32495	Canola	mitochondrion, plastid	37.67	41.67
Bra032560.1-P	Field mustard	mitochondrion, plastid	37.67	41.35
TraesCS7B01G319100.1	Wheat	plastid	39.38	41.22
HORVU7Hr1G096970.10	Barley	plastid	38.7	40.94
TraesCS7D01G411500.1	Wheat	plastid	39.04	40.71
CDY37443	Canola	mitochondrion	36.99	40.6
KXG28800	Sorghum	plastid	40.41	40.41
AT1G03055.1	Thale cress	plastid	35.27	39.02
Solyc08g008630.2.1	Tomato	plastid	28.77	31.34
Solyc06g084610.2.1	Tomato	plastid	23.97	27.89

Protein Annotations

KEGG:00906+5.2.1.14	MapMan:11.9.1.1	InterPro:D27-like	InterPro:DUF4033	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009653	GO:GO:0009987	GO:GO:0010223	GO:GO:0016859	GO:GO:1901601
UniProt:K4CUK1	PFAM:PF13225	PANTHER:PTHR33591	PANTHER:PTHR33591:SF3	EnsemblPlantsGene:Solyc09g065750.2	EnsemblPlants:Solyc09g065750.2.1
UniParc:UPI000276C931	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:64025732..64031085

Molecular Weight (calculated)

33810.0 Da

IEP (calculated)

8.790

GRAVY (calculated)

-0.311

Length

292 amino acids

Sequence
(BLAST)

001: MEANLVLSYQ SFSKVSMRNI KINTYYKYNK LAYPSTCCVL TKPPHNNHSS NCHVYKDNWF DHLAINHLSQ SIQATTGLRN KKSGYEGFVE AARVVYVNFN
101: STHQANLVIE SLQRAFPKPI LSLVKMLLPE SKWAREYCAI FTTIFFPWLV GPCEVKESEF NGRKENNVVH IKKCRFLEET NCVGMCTNLC KMPSQLFIKD
201: TLGISVNMVP NFDDMSCEMI FGQDPPPLDK DPAFRQPCYK LCNFFIYHNY FRKKHIILVM PEYVLLHAGK LNNKHQADCN SQIKKKDHLE IS

Best Arabidopsis Sequence Match ( AT1G03055.1 )
(BLAST)

001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH

Arabidopsis Description

D27Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.