Factsheet for TraesCS7B01G319100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G411500.1	Wheat	plastid	93.19	92.86
TraesCS7A01G418900.1	Wheat	plastid	89.25	89.57
HORVU7Hr1G096970.10	Barley	plastid	82.08	82.97
Os11t0587000-01	Rice	plastid	68.82	69.06
Zm00001d007560_P004	Maize	plastid	63.44	64.36
Zm00001d007549_P003	Maize	plastid	62.72	64.1
KXG28800	Sorghum	plastid	66.67	63.7
GSMUA_Achr1P14050_001	Banana	mitochondrion	48.03	54.92
VIT_00s0179g00330.t01	Wine grape	mitochondrion, plastid	46.24	52.23
KRH71353	Soybean	cytosol	46.24	51.81
KRH32085	Soybean	mitochondrion, plastid	46.24	50.39
PGSC0003DMT400049687	Potato	extracellular	21.51	49.59
GSMUA_Achr2P08930_001	Banana	mitochondrion, plastid	48.03	48.03
AT1G03055.1	Thale cress	plastid	40.5	42.8
CDY32495	Canola	mitochondrion, plastid	38.35	40.53
CDY37443	Canola	mitochondrion	37.99	39.85
Solyc09g065750.2.1	Tomato	cytosol	41.22	39.38
Bra032560.1-P	Field mustard	mitochondrion, plastid	36.92	38.72
TraesCS1B01G092300.1	Wheat	plastid	16.13	25.57
TraesCS1B01G092200.1	Wheat	plastid	24.01	24.36

Protein Annotations

KEGG:00906+5.2.1.14	MapMan:11.9.1.1	InterPro:D27-like	InterPro:DUF4033	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009653	GO:GO:0009987	GO:GO:0010223	GO:GO:0016859	GO:GO:1901601
PFAM:PF13225	PANTHER:PTHR33591	PANTHER:PTHR33591:SF3	EnsemblPlantsGene:TraesCS7B01G319100	EnsemblPlants:TraesCS7B01G319100.1	SEG:seg

Description

No Description!

Coordinates

chr7B:-:568679510..568684405

Molecular Weight (calculated)

30889.5 Da

IEP (calculated)

8.537

GRAVY (calculated)

-0.110

Length

279 amino acids

Sequence
(BLAST)

001: MEATALVLLP HSHSGLTARA PPCVGGRGVS CVTKKSYVRI KRSSTVRGVM ARPQEATLAR VPAPAPTRPV RETAAVTTTT TVYHDTWFDN LAIGYLSRKL
101: QEASGIKNGK HGYQGLIEAA VTISRIFRLD TQCEIVASAL ERAMPSYIVT MIKVMMPPSR FSREYFAAFT TIFFPWLVGP CEVRESEVDG TREKNVVYIP
201: KCRFLESTNC VGMCTNLCKI PSQKFMQDSL GVSVYMSPNF EDMSCEMIFG QQPPEDDPAL KQPCFSTKCI AKQDYGVNC

Best Arabidopsis Sequence Match ( AT1G03055.1 )
(BLAST)

001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH

Arabidopsis Description

D27Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.