Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g065750.2.1 | Tomato | cytosol | 68.59 | 28.42 |
| KRH71353 | Soybean | cytosol | 56.2 | 27.31 |
| VIT_00s0179g00330.t01 | Wine grape | mitochondrion, plastid | 52.89 | 25.91 |
| KRH32085 | Soybean | mitochondrion, plastid | 53.72 | 25.39 |
| GSMUA_Achr1P14050_001 | Banana | mitochondrion | 48.76 | 24.18 |
| Bra032560.1-P | Field mustard | mitochondrion, plastid | 49.59 | 22.56 |
| CDY32495 | Canola | mitochondrion, plastid | 47.93 | 21.97 |
| Os11t0587000-01 | Rice | plastid | 50.41 | 21.94 |
| TraesCS7A01G418900.1 | Wheat | plastid | 50.41 | 21.94 |
| CDY37443 | Canola | mitochondrion | 47.93 | 21.8 |
| HORVU7Hr1G096970.10 | Barley | plastid | 49.59 | 21.74 |
| GSMUA_Achr2P08930_001 | Banana | mitochondrion, plastid | 49.59 | 21.51 |
| TraesCS7B01G319100.1 | Wheat | plastid | 49.59 | 21.51 |
| TraesCS7D01G411500.1 | Wheat | plastid | 49.59 | 21.43 |
| AT1G03055.1 | Thale cress | plastid | 46.28 | 21.21 |
| Zm00001d007549_P003 | Maize | plastid | 47.11 | 20.88 |
| Zm00001d007560_P004 | Maize | plastid | 47.11 | 20.73 |
| KXG28800 | Sorghum | plastid | 49.59 | 20.55 |
| PGSC0003DMT400015016 | Potato | plastid | 36.36 | 16.3 |
| PGSC0003DMT400061819 | Potato | plastid | 28.93 | 13.94 |
| PGSC0003DMT400061815 | Potato | cytosol | 20.66 | 12.63 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400049687 | EnsemblPlantsGene:PGSC0003DMG400019307 | InterPro:D27-like | InterPro:DUF4033 | KEGG:00906+5.2.1.14 | PANTHER:PTHR33591 |
| PANTHER:PTHR33591:SF3 | PFAM:PF13225 | PGSC:PGSC0003DMG400019307 | UniParc:UPI0002967A5F | UniProt:M1BP64 | MapMan:35.1 |
Description
DWARF27 [Source:PGSC_GENE;Acc:PGSC0003DMG400019307]
Coordinates
chr9:-:48621505..48622700
Molecular Weight (calculated)
14086.3 Da
IEP (calculated)
8.825
GRAVY (calculated)
-0.130
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPESKWAR EYCAIFTTIF FPWLVGPCEV KESEFNGRKE NNVVHIKKCR FLEETNCVGM CTNLCKMPSQ LFIKDTLGMS VNMVPSKYKL IPNTNTHYSK
101: NFHYVVVPNA LFVRTKFHID S
101: NFHYVVVPNA LFVRTKFHID S
001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH
Arabidopsis Description
D27Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.