Factsheet for TraesCS7A01G418900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G319100.1	Wheat	plastid	89.57	89.25
TraesCS7D01G411500.1	Wheat	plastid	88.13	87.5
HORVU7Hr1G096970.10	Barley	plastid	83.81	84.42
Os11t0587000-01	Rice	plastid	66.91	66.91
KXG28800	Sorghum	plastid	66.55	63.36
Zm00001d007560_P004	Maize	plastid	62.59	63.27
Zm00001d007549_P003	Maize	plastid	61.87	63.0
GSMUA_Achr1P14050_001	Banana	mitochondrion	48.2	54.92
VIT_00s0179g00330.t01	Wine grape	mitochondrion, plastid	46.4	52.23
KRH71353	Soybean	cytosol	46.4	51.81
KRH32085	Soybean	mitochondrion, plastid	46.76	50.78
PGSC0003DMT400049687	Potato	extracellular	21.94	50.41
GSMUA_Achr2P08930_001	Banana	mitochondrion, plastid	48.2	48.03
AT1G03055.1	Thale cress	plastid	41.37	43.56
CDY32495	Canola	mitochondrion, plastid	38.49	40.53
CDY37443	Canola	mitochondrion	38.13	39.85
Solyc09g065750.2.1	Tomato	cytosol	41.73	39.73
Bra032560.1-P	Field mustard	mitochondrion, plastid	37.77	39.47
TraesCS7A01G317900.1	Wheat	plastid	32.37	34.09
TraesCS1A01G073000.2	Wheat	mitochondrion, plastid	23.74	24.0

Protein Annotations

KEGG:00906+5.2.1.14	MapMan:11.9.1.1	InterPro:D27-like	InterPro:DUF4033	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009653	GO:GO:0009987	GO:GO:0010223	GO:GO:0016859	GO:GO:1901601
PFAM:PF13225	PANTHER:PTHR33591	PANTHER:PTHR33591:SF3	EnsemblPlantsGene:TraesCS7A01G418900	EnsemblPlants:TraesCS7A01G418900.1	SEG:seg

Description

No Description!

Coordinates

chr7A:-:610450476..610455150

Molecular Weight (calculated)

30718.3 Da

IEP (calculated)

8.734

GRAVY (calculated)

-0.139

Length

278 amino acids

Sequence
(BLAST)

001: MEATALVLLP HSHSGLTARA PPCVGGSSAM KRSYVRRIKR SSTVRGVMAR PQEATLARVP APAPTRPVRE TAAATTTTKT VYHDTWFDNL AIGYLSRKLQ
101: EASGIKNGKH GYQGLIEAAV AISRIFRLDT QCEVVAGALE RAMPSYIVTM IKVMMPPSKF SREYFAAFTT IFFPWLVGPC EVRESEVDGT REKNVVYIPK
201: CRFLESTNCV GMCTNLCKIP SQKFMQDSLG VSVYMSPNFE DMSCEMIFGQ QPPEDDPALK QPCFSTKCIA KQDYGVSC

Best Arabidopsis Sequence Match ( AT1G03055.1 )
(BLAST)

001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH

Arabidopsis Description

D27Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.