CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32085	Soybean	mitochondrion, plastid	89.56	87.11
VIT_00s0179g00330.t01	Wine grape	mitochondrion, plastid	61.04	61.54
PGSC0003DMT400049687	Potato	extracellular	27.31	56.2
GSMUA_Achr1P14050_001	Banana	mitochondrion	47.79	48.77
Zm00001d007549_P003	Maize	plastid	52.21	47.62
Zm00001d007560_P004	Maize	plastid	52.21	47.27
Os11t0587000-01	Rice	plastid	52.61	47.12
TraesCS7A01G418900.1	Wheat	plastid	51.81	46.4
TraesCS7B01G319100.1	Wheat	plastid	51.81	46.24
HORVU7Hr1G096970.10	Barley	plastid	51.0	46.01
Solyc09g065750.2.1	Tomato	cytosol	53.41	45.55
TraesCS7D01G411500.1	Wheat	plastid	51.0	45.36
CDY32495	Canola	mitochondrion, plastid	46.59	43.94
GSMUA_Achr2P08930_001	Banana	mitochondrion, plastid	49.0	43.73
KXG28800	Sorghum	plastid	51.0	43.49
AT1G03055.1	Thale cress	plastid	45.78	43.18
Bra032560.1-P	Field mustard	mitochondrion, plastid	45.78	42.86
CDY37443	Canola	mitochondrion	45.78	42.86
KRH17565	Soybean	mitochondrion, plastid	33.33	31.2
KRH70396	Soybean	plastid	33.33	30.74
KRH69204	Soybean	plastid	25.7	24.24
KRH31781	Soybean	plastid	24.1	22.06

Protein Annotations

EMBL:ACUP02000894	EMBL:KY486796	EnsemblPlants:KRH71353	EnsemblPlantsGene:GLYMA_02G143300	EntrezGene:100782912	GO:GO:0003674
GO:GO:0003824	GO:GO:0016853	InterPro:D27-like	InterPro:DUF4033	KEGG:00906+5.2.1.14	MetaCyc:PWY-7101
PANTHER:PTHR33591	PANTHER:PTHR33591:SF3	PFAM:PF13225	ProteinID:KRH71353	ProteinID:KRH71353.1	SEG:seg
UniParc:UPI0002336BF8	UniProt:I1JF58	MapMan:11.9.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:14781618..14787876

Molecular Weight (calculated)

27883.0 Da

IEP (calculated)

8.209

GRAVY (calculated)

-0.136

Length

249 amino acids

Sequence
(BLAST)

001: MEAKLVAQCN SPTLTLAHWK LKQPCVVGVL ARPADDISGE ARKTNHVYKD GLFDRIAINY LSKCVQEATG LKNSKSGYES LVEAATLASQ RFSPIEQHQL
101: VIQSLDRAFP KPMLLLIRTL LPPSKFARKL FAIFTTLFFA WLVGPSEVRE SEVEGRRERN VVHIKKCRFL EETNCVGMCI NLCKLPSQSF IKDSLGMSVN
201: MVPNFDDMSC EMIFGEDPPE STDDPALNQP CFKLCKAKRS HGTNCLVIN

Best Arabidopsis Sequence Match ( AT1G03055.1 )
(BLAST)

001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH

Arabidopsis Description

D27Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.