CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31781	Soybean	plastid	78.41	76.1
VIT_07s0005g01610.t01	Wine grape	plastid	61.36	62.07
PGSC0003DMT400061819	Potato	plastid	58.71	61.75
Solyc06g084610.2.1	Tomato	plastid	58.33	61.35
CDX90961	Canola	plastid	56.82	58.59
Bra000901.1-P	Field mustard	plastid	56.44	58.2
AT4G01995.1	Thale cress	plastid	56.82	58.14
CDX91821	Canola	plastid	55.68	56.76
PGSC0003DMT400061815	Potato	cytosol	41.29	55.05
EES18959	Sorghum	plastid	56.06	53.43
TraesCS1B01G092200.1	Wheat	plastid	54.92	52.73
Zm00001d024718_P004	Maize	plastid	55.3	52.71
TraesCS1A01G073000.2	Wheat	mitochondrion, plastid	53.79	51.64
TraesCS1D01G075900.1	Wheat	plastid	53.79	51.64
Os05t0131100-01	Rice	plastid	52.27	51.11
HORVU1Hr1G015940.3	Barley	plastid	52.65	45.28
TraesCS1B01G092300.1	Wheat	plastid	29.17	43.75
Os05t0131401-00	Rice	plastid	27.27	40.22
KRH17565	Soybean	mitochondrion, plastid	30.3	30.08
KRH70396	Soybean	plastid	29.55	28.89
KRH71353	Soybean	cytosol	24.24	25.7
KRH32085	Soybean	mitochondrion, plastid	23.86	24.61

Protein Annotations

EMBL:ACUP02000690	EnsemblPlants:KRH69204	EnsemblPlantsGene:GLYMA_02G011300	InterPro:D27-like	InterPro:DUF4033	KEGG:00906+5.2.1.14
MetaCyc:PWY-7101	PANTHER:PTHR33591	PANTHER:PTHR33591:SF2	PFAM:PF13225	ProteinID:KRH69204	ProteinID:KRH69204.1
SEG:seg	UniParc:UPI000233774D	UniProt:I1JBF3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr2:+:1059116..1061558

Molecular Weight (calculated)

28725.1 Da

IEP (calculated)

8.141

GRAVY (calculated)

0.075

Length

264 amino acids

Sequence
(BLAST)

001: MTALGVVGGS GAPVPVVCSS VRNTRFRVSF SSSPSSGPKT VEQVGIAAPK SEYKPGVFDD LFLNLFRNKL VQEVGWDSEK PGYDGLIEVA NRLMMKGTTN
101: TATVEAAVRI LRSLFPPYLL ELYKMLIVPI GGGKIAAMMV ARVTVLTCQW LMGPCKLNSV DLPDGISCSS GVYVERCKYL EESKCVGICT NTCKFPTQSF
201: FKDHMGVPLL MEPNFGDYSC QFKFGVLPPL DDTIVKEPCL EACPNASQRR TVARNIDITA CPKT

Best Arabidopsis Sequence Match ( AT4G01995.1 )
(BLAST)

001: MAVLIQVLLP PPTTIVFSNS FSTKLILTRR LRCRISNSSE VKSDEGAPKL EYKPGPLDDF FMQSFRNKLV EEVGSDSEKP GYVGLIELVK LLLLKGRTRS
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA

Arabidopsis Description

Beta-carotene isomerase D27 [Source:UniProtKB/TrEMBL;Acc:Q8W4C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.