Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os05t0131100-01 | Rice | plastid | 80.45 | 53.33 |
TraesCS1B01G092300.1 | Wheat | plastid | 48.04 | 48.86 |
Zm00001d024718_P004 | Maize | plastid | 64.25 | 41.52 |
EES18959 | Sorghum | plastid | 63.13 | 40.79 |
TraesCS1D01G075900.1 | Wheat | plastid | 60.89 | 39.64 |
TraesCS1A01G073000.2 | Wheat | mitochondrion, plastid | 60.89 | 39.64 |
TraesCS1B01G092200.1 | Wheat | plastid | 60.34 | 39.27 |
HORVU1Hr1G015940.3 | Barley | plastid | 60.89 | 35.5 |
Solyc06g084610.2.1 | Tomato | plastid | 39.66 | 28.29 |
PGSC0003DMT400061819 | Potato | plastid | 39.66 | 28.29 |
AT4G01995.1 | Thale cress | plastid | 40.22 | 27.91 |
Bra000901.1-P | Field mustard | plastid | 39.11 | 27.34 |
CDX90961 | Canola | plastid | 39.11 | 27.34 |
KRH69204 | Soybean | plastid | 40.22 | 27.27 |
VIT_07s0005g01610.t01 | Wine grape | plastid | 39.66 | 27.2 |
KRH31781 | Soybean | plastid | 40.78 | 26.84 |
CDX91821 | Canola | plastid | 36.87 | 25.48 |
PGSC0003DMT400061815 | Potato | cytosol | 18.44 | 16.67 |
Os08t0114100-01 | Rice | plastid | 22.91 | 15.71 |
Os11t0587000-01 | Rice | plastid | 21.79 | 14.03 |
Protein Annotations
EnsemblPlants:Os05t0131401-00 | EnsemblPlantsGene:Os05g0131401 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009056 | GO:GO:0016787 | InterPro:D27-like | InterPro:DUF4033 | KEGG:00906+5.2.1.14 | PANTHER:PTHR33591 |
PANTHER:PTHR33591:SF2 | PFAM:PF13225 | ProteinID:BAS92115.1 | SEG:seg | UniParc:UPI000393B82B | UniProt:A0A0P0WHI4 |
MapMan:35.2 | : | : | : | : | : |
Description
Conserved hypothetical protein. (Os05t0131401-00)
Coordinates
chr5:-:1840616..1844553
Molecular Weight (calculated)
19624.2 Da
IEP (calculated)
5.311
GRAVY (calculated)
-0.384
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPSPPCLL RVLLPVASSS SRGLRRRRRP TTSLLRCSSP SADTASSSGE GGREYEPSFA DDFLHAFFRA KMVEEVGWDS EKPGYTGLIE VANRPMVKGK
101: SALEIEQSAT FFKDHIGVDL YMEPNFEDYS CQFNFGVPPP PLDTDKALKE PCLDICTNAG RWRVLGTGSS TDSLQCPQV
101: SALEIEQSAT FFKDHIGVDL YMEPNFEDYS CQFNFGVPPP PLDTDKALKE PCLDICTNAG RWRVLGTGSS TDSLQCPQV
001: MAVLIQVLLP PPTTIVFSNS FSTKLILTRR LRCRISNSSE VKSDEGAPKL EYKPGPLDDF FMQSFRNKLV EEVGSDSEKP GYVGLIELVK LLLLKGRTRS
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA
Arabidopsis Description
Beta-carotene isomerase D27 [Source:UniProtKB/TrEMBL;Acc:Q8W4C4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.