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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0131100-01 Rice plastid 80.45 53.33
TraesCS1B01G092300.1 Wheat plastid 48.04 48.86
Zm00001d024718_P004 Maize plastid 64.25 41.52
EES18959 Sorghum plastid 63.13 40.79
TraesCS1D01G075900.1 Wheat plastid 60.89 39.64
TraesCS1A01G073000.2 Wheat mitochondrion, plastid 60.89 39.64
TraesCS1B01G092200.1 Wheat plastid 60.34 39.27
HORVU1Hr1G015940.3 Barley plastid 60.89 35.5
Solyc06g084610.2.1 Tomato plastid 39.66 28.29
PGSC0003DMT400061819 Potato plastid 39.66 28.29
AT4G01995.1 Thale cress plastid 40.22 27.91
Bra000901.1-P Field mustard plastid 39.11 27.34
CDX90961 Canola plastid 39.11 27.34
KRH69204 Soybean plastid 40.22 27.27
VIT_07s0005g01610.t01 Wine grape plastid 39.66 27.2
KRH31781 Soybean plastid 40.78 26.84
CDX91821 Canola plastid 36.87 25.48
PGSC0003DMT400061815 Potato cytosol 18.44 16.67
Os08t0114100-01 Rice plastid 22.91 15.71
Os11t0587000-01 Rice plastid 21.79 14.03
Protein Annotations
EnsemblPlants:Os05t0131401-00EnsemblPlantsGene:Os05g0131401GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0016787InterPro:D27-likeInterPro:DUF4033KEGG:00906+5.2.1.14PANTHER:PTHR33591
PANTHER:PTHR33591:SF2PFAM:PF13225ProteinID:BAS92115.1SEG:segUniParc:UPI000393B82BUniProt:A0A0P0WHI4
MapMan:35.2:::::
Description
Conserved hypothetical protein. (Os05t0131401-00)
Coordinates
chr5:-:1840616..1844553
Molecular Weight (calculated)
19624.2 Da
IEP (calculated)
5.311
GRAVY (calculated)
-0.384
Length
179 amino acids
Sequence
(BLAST)
001: MAAPSPPCLL RVLLPVASSS SRGLRRRRRP TTSLLRCSSP SADTASSSGE GGREYEPSFA DDFLHAFFRA KMVEEVGWDS EKPGYTGLIE VANRPMVKGK
101: SALEIEQSAT FFKDHIGVDL YMEPNFEDYS CQFNFGVPPP PLDTDKALKE PCLDICTNAG RWRVLGTGSS TDSLQCPQV
Best Arabidopsis Sequence Match ( AT4G01995.1 )
(BLAST)
001: MAVLIQVLLP PPTTIVFSNS FSTKLILTRR LRCRISNSSE VKSDEGAPKL EYKPGPLDDF FMQSFRNKLV EEVGSDSEKP GYVGLIELVK LLLLKGRTRS
101: ETSDAAVRIL KSLFPPLILE LYKLLIAPIA QGKLAALMVA RVTVLTCQWL MGPSKVNIID LPNGESWDSG VFVEKCQYLE ESKCVGVCIN TCKLPTQTFF
201: KDYMGVPLVM EPNFKDYSCQ FKFGVAPPED DGNVNEPCFE TCSIAGRRKL KSGECPLA
Arabidopsis Description
Beta-carotene isomerase D27 [Source:UniProtKB/TrEMBL;Acc:Q8W4C4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.