CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007560_P004	Maize	plastid	68.15	72.36
Zm00001d007549_P003	Maize	plastid	67.47	72.16
Os11t0587000-01	Rice	plastid	64.38	67.63
TraesCS7B01G319100.1	Wheat	plastid	63.7	66.67
TraesCS7A01G418900.1	Wheat	plastid	63.36	66.55
TraesCS7D01G411500.1	Wheat	plastid	63.7	66.43
HORVU7Hr1G096970.10	Barley	plastid	59.59	63.04
GSMUA_Achr1P14050_001	Banana	mitochondrion	45.89	54.92
VIT_00s0179g00330.t01	Wine grape	mitochondrion, plastid	43.49	51.42
KRH71353	Soybean	cytosol	43.49	51.0
GSMUA_Achr2P08930_001	Banana	mitochondrion, plastid	47.6	49.82
PGSC0003DMT400049687	Potato	extracellular	20.55	49.59
KRH32085	Soybean	mitochondrion, plastid	42.81	48.83
AT1G03055.1	Thale cress	plastid	37.33	41.29
Solyc09g065750.2.1	Tomato	cytosol	40.41	40.41
CDY37443	Canola	mitochondrion	36.64	40.23
CDY32495	Canola	mitochondrion, plastid	36.3	40.15
Bra032560.1-P	Field mustard	mitochondrion, plastid	35.96	39.47
KXG24264	Sorghum	plastid	30.48	33.09
EES18959	Sorghum	plastid	23.97	25.27

Protein Annotations

KEGG:00906+5.2.1.14	MapMan:11.9.1.1	UniProt:A0A1B6PSZ9	InterPro:D27-like	InterPro:DUF4033	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009653	GO:GO:0009987	GO:GO:0010223	GO:GO:0016859
GO:GO:1901601	EnsemblPlants:KXG28800	ProteinID:KXG28800	ProteinID:KXG28800.1	PFAM:PF13225	PANTHER:PTHR33591
PANTHER:PTHR33591:SF3	MetaCyc:PWY-7101	EnsemblPlantsGene:SORBI_3005G168200	UniParc:UPI00081AD943	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:64672109..64677619

Molecular Weight (calculated)

32327.1 Da

IEP (calculated)

8.474

GRAVY (calculated)

-0.216

Length

292 amino acids

Sequence
(BLAST)

001: MEVAATCMPL AHAHGVGVLP AWSSPSTAAA TARSVTRQSY TYTRRKRLAT ARGVMARPQE VVVAPAPPAR PTPPPPTTTK ERTALAPPPT TTTYHDSWFD
101: KLAIGYLSRN LQEASGMKNG KDGYEGLIEA ALAISALFRV DQQLETVAKA LEQAFPSYIL TMIKIMMPPS RFSREYFAAF TTIFFPWLVG PCEVRESEVD
201: GRKEKNVVYI PKCRFLESTN CVGMCTNLCK IPCQKFIQDS LGTAVYMSPN FEDMSCEMIF GQQPPEDDPA LKQPCFRTKC IAKQNHQVNC SI

Best Arabidopsis Sequence Match ( AT1G03055.1 )
(BLAST)

001: MNTKLSLSQT KIFTFTTWFN DTRSGLDRRS SISPTLCSKP VYSGKLKAAK ETARIETSNT KNASIEDSFF SKIAINYLSK NLQDAAGISS SSKSTDYDRL
101: VDTATRVSRN FDTKQQHEFV LSSLDRALPT VISSLIKMAF PPSKVSRELF ALFTTISFAW LVGPSEVRET EVNGRKEKSV VYIEKCRFLE QSNCVGMCTH
201: ICKIPSQIFI KNSLGMPIYM EPDFNDLSCK MMFGREPPEI EDDPAMKQPC FEFCKSNKSY GVKH

Arabidopsis Description

D27Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.