Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38220 | Canola | plastid | 90.4 | 89.68 |
| Bra027784.1-P | Field mustard | mitochondrion, plastid | 90.0 | 89.29 |
| CDY08324 | Canola | cytosol | 71.6 | 88.61 |
| Bra027662.1-P | Field mustard | mitochondrion | 88.8 | 88.1 |
| CDY34380 | Canola | mitochondrion | 88.8 | 88.1 |
| CDY25531 | Canola | mitochondrion | 88.4 | 87.7 |
| GSMUA_Achr3P12260_001 | Banana | cytosol | 68.0 | 78.7 |
| VIT_02s0025g02640.t01 | Wine grape | plastid | 74.8 | 70.3 |
| Os08t0114100-01 | Rice | plastid | 72.4 | 69.35 |
| KRH17565 | Soybean | mitochondrion, plastid | 73.6 | 69.17 |
| Solyc08g008630.2.1 | Tomato | plastid | 72.8 | 67.91 |
| PGSC0003DMT400015016 | Potato | plastid | 73.2 | 67.78 |
| KRH70396 | Soybean | plastid | 72.8 | 67.41 |
| TraesCSU01G097100.1 | Wheat | plastid | 69.6 | 66.67 |
| TraesCS7A01G317900.1 | Wheat | plastid | 69.6 | 65.91 |
| TraesCS7D01G314600.1 | Wheat | plastid | 69.6 | 65.91 |
| KXG24264 | Sorghum | plastid | 70.4 | 65.43 |
| Zm00001d045816_P001 | Maize | mitochondrion | 32.0 | 61.54 |
| HORVU7Hr1G076030.6 | Barley | plastid | 68.4 | 58.16 |
| Zm00001d035081_P001 | Maize | plastid | 68.0 | 55.74 |
| AT1G03055.1 | Thale cress | plastid | 32.8 | 31.06 |
| AT4G01995.1 | Thale cress | plastid | 30.8 | 29.84 |
Protein Annotations
| KEGG:00906+5.2.1.14 | MapMan:35.1 | EntrezGene:842776 | UniProt:A0A178W447 | ProteinID:AAF19681.1 | ProteinID:AEE34273.1 |
| EMBL:AK226297 | ArrayExpress:AT1G64680 | EnsemblPlantsGene:AT1G64680 | RefSeq:AT1G64680 | TAIR:AT1G64680 | RefSeq:AT1G64680-TAIR-G |
| EnsemblPlants:AT1G64680.1 | TAIR:AT1G64680.1 | Unigene:At.28247 | EMBL:BT010194 | InterPro:D27-like | InterPro:DUF4033 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0009534 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009941 | GO:GO:0016853 |
| RefSeq:NP_564838.1 | ProteinID:OAP11892.1 | PFAM:PF13225 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33591 | PANTHER:PTHR33591:SF1 | UniProt:Q9SGU7 | UniParc:UPI00000A423E |
| SEG:seg | : | : | : | : | : |
Description
At1g64680 [Source:UniProtKB/TrEMBL;Acc:Q9SGU7]
Coordinates
chr1:+:24035941..24037429
Molecular Weight (calculated)
28164.2 Da
IEP (calculated)
8.309
GRAVY (calculated)
-0.333
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAIASLQAV NLTFRRRSTR CGIAEPSGEP APMGLKTRYE DGLVERVFMG LFARKMDKFG SKKKKDTKEK GFWEYDYESF VEVSKRVMQG RSRVQQQEAV
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
101: REVLLSMLPP GAPEQFRKLF PPTKWAAEFN AALTVPFFHW LVGPSQVIEV EVNGVKQRSG VRIKKCRYLE NSGCVGMCVN MCKIPTQDFF TNEFGLPLTM
201: NPNYEDMSCE MIYGQAPPAF EEDVATKQPC LADICSMSNP SSPICPKLEA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.