Factsheet for PGSC0003DMT400022255

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043447	Potato	cytosol	82.28	70.26
PGSC0003DMT400022254	Potato	cytosol	81.98	70.0
PGSC0003DMT400022258	Potato	cytosol	80.18	68.11
PGSC0003DMT400043464	Potato	cytosol	74.17	61.14
PGSC0003DMT400076178	Potato	cytosol	71.17	60.93
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	69.97	59.9
PGSC0003DMT400076179	Potato	cytosol	67.87	59.63
PGSC0003DMT400069814	Potato	cytosol	63.96	54.34
PGSC0003DMT400004133	Potato	cytosol	41.74	36.58
PGSC0003DMT400095725	Potato	plastid	39.34	33.08

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	UniProt:M1AGF8	PFAM:PF00195	PFAM:PF02797	EnsemblPlantsGene:PGSC0003DMG400008633	PGSC:PGSC0003DMG400008633
EnsemblPlants:PGSC0003DMT400022255	PIRSF:PIRSF000451	PANTHER:PTHR11877	PANTHER:PTHR11877:SF27	InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901
InterPro:Thiolase-like	UniParc:UPI0002957DD3	:	:	:	:

Description

Chalcone synthase G [Source:PGSC_GENE;Acc:PGSC0003DMG400008633]

Coordinates

chr12:+:58741442..58742633

Molecular Weight (calculated)

36512.8 Da

IEP (calculated)

8.700

GRAVY (calculated)

0.073

Length

333 amino acids

Sequence
(BLAST)

001: MYKGDRSMIK KRYFHLTEEI LKKNPNLCKY KASSFNVRQE IAILEVPKLG KEAAEKAINE WGQSKSKITH LVFCTTSGVD VPGADYQLTK LLGLEPSVKR
101: FMMYQQGCSA GGTALRLAKD LAENNKGTRV LVVCSEINLL CFHAPSEAEI DVLIGQALFS DGASAVIVGS NPIMTVERPL FELVFATQNL LPDSGHAIIG
201: NLNEAGLIAK IHKDTPMLIS KNIERILVEA FQPLGISDWN SIFWVSHAGG RAILDQIELK LGLRPEKLKA TRNIMRNYGN MGSVSVLFVL DEMRKTSIRA
301: ELGTTGEGLV WGVLLGFGPG LTIEAIVLRS VSI

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.