Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g025230.2.1 | Tomato | cytosol | 97.3 | 96.22 |
| VIT_07s0005g03430.t01 | Wine grape | cytosol | 44.04 | 43.65 |
| KRH32187 | Soybean | cytosol | 42.25 | 39.83 |
| KRH19560 | Soybean | cytosol | 41.12 | 38.94 |
| GSMUA_Achr1P05640_001 | Banana | cytosol | 35.73 | 38.31 |
| PGSC0003DMT400054383 | Potato | cytosol | 40.0 | 37.87 |
| PGSC0003DMT400065886 | Potato | cytosol | 35.51 | 32.18 |
| PGSC0003DMT400030364 | Potato | plastid | 30.79 | 32.16 |
| PGSC0003DMT400013297 | Potato | cytosol | 33.03 | 25.48 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400026646 | EnsemblPlantsGene:PGSC0003DMG400010296 | EntrezGene:102606320 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF82 | PFAM:PF00650 |
| PFscan:PS50191 | PGSC:PGSC0003DMG400010296 | RefSeq:XP_006351692.1 | SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI00029540C2 | UniProt:M1ANI0 | MapMan:35.1 | : | : |
Description
Patellin-4 [Source:PGSC_GENE;Acc:PGSC0003DMG400010296]
Coordinates
chr9:+:50128561..50130692
Molecular Weight (calculated)
52041.7 Da
IEP (calculated)
6.450
GRAVY (calculated)
-0.465
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEVVVPVA EEDIVDDIMS SDNDTESDDH LDDDDDHQPI FDQPGQLVSP LDIKASRKNA LLRLRCRVED AILGGYIYGK NKNKSLSVKT ITEDLTGISL
101: WGVPLLPSED NTRTDIVLLN FLKAKDYGVY DAYKMMRKTL RWRREFRVTE ILDEKLFSPD LEKLWYNDDG KDREGRLLCY NVFKNIKNKE LEEEIWGRHN
201: HHHECLRWRI HILEKAIQQL EFKQGGVNSV LMITDLGNSP GNAWKEVRWI NRKMMSLVHD HYPGIIYKNI FINVPVWFST VHALNLRMIT QRSKNAFIFV
301: KPSKVTETLL KYISPENLLA EYGGLKKDKD VEFSTDDKVL EISIKPCSFC LIKMPVKEVE VTITWDLIVV GNEVSYKEEF IPDDDCSYRV MLQEDKKMVE
401: SVRNSFHIRE EGRIVITIDN PTYKKKTAFY RYKTKPSVPM YMCLK
101: WGVPLLPSED NTRTDIVLLN FLKAKDYGVY DAYKMMRKTL RWRREFRVTE ILDEKLFSPD LEKLWYNDDG KDREGRLLCY NVFKNIKNKE LEEEIWGRHN
201: HHHECLRWRI HILEKAIQQL EFKQGGVNSV LMITDLGNSP GNAWKEVRWI NRKMMSLVHD HYPGIIYKNI FINVPVWFST VHALNLRMIT QRSKNAFIFV
301: KPSKVTETLL KYISPENLLA EYGGLKKDKD VEFSTDDKVL EISIKPCSFC LIKMPVKEVE VTITWDLIVV GNEVSYKEEF IPDDDCSYRV MLQEDKKMVE
401: SVRNSFHIRE EGRIVITIDN PTYKKKTAFY RYKTKPSVPM YMCLK
001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS
Arabidopsis Description
PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.