CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19560	Soybean	cytosol	90.89	91.28
VIT_07s0005g03430.t01	Wine grape	cytosol	46.82	49.22
PGSC0003DMT400026646	Potato	cytosol	39.83	42.25
GSMUA_Achr1P05640_001	Banana	cytosol	36.86	41.93
Solyc09g025230.2.1	Tomato	cytosol	38.98	40.89
KRH11846	Soybean	cytosol	38.14	38.71
KRH36854	Soybean	cytosol	37.71	38.12
KRG99105	Soybean	cytosol	11.02	35.14
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	30.72	34.2
KRH76050	Soybean	cytosol	29.87	33.49
KRH65546	Soybean	cytosol	29.45	33.02
KRH00348	Soybean	cytosol	30.3	32.87
KRH59683	Soybean	cytosol	32.63	28.57
KRH54012	Soybean	nucleus	33.69	28.55
KRH63933	Soybean	plasma membrane	32.84	27.83
KRH41016	Soybean	endoplasmic reticulum	32.84	26.96
KRH44929	Soybean	endoplasmic reticulum	32.84	26.91
KRH23751	Soybean	endoplasmic reticulum	32.42	25.25

Protein Annotations

EntrezGene:100783110	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02006104	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GLYMA_10G037200	InterPro:IPR001251	InterPro:IPR036865	UniProt:K7LHA2
EnsemblPlants:KRH32187	ProteinID:KRH32187	ProteinID:KRH32187.1	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF82	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00023C925B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:3263457..3265706

Molecular Weight (calculated)

54405.2 Da

IEP (calculated)

8.076

GRAVY (calculated)

-0.482

Length

472 amino acids

Sequence
(BLAST)

001: MNNTNECCCN DENGKIVVGV PLVFNFFDKN TNNIEKSLKV QLEKKNQLED HDCDQEDDDD DLEATSLGDA APSPAEIKLK AEKSLLEFRC KVEDAILGNY
101: LLGEQDHEKL APQEIVVARE QIREITLWGV PLLPSKAHKG TDVVLRKFLK AKDFKVSEAF DMLQKTLVWR RENNVDRIID EDLGAEFGNN NAGFLCSKDR
201: EGRPVCYHVC GIFKDRRIYK KTFGSDNKCD KYLRWRIQLI EKAVKKLCFR EGGVNSVLQV FDLRNTPMQG TKELNSLSKR ALILFQNYYP EIIHKNIIVY
301: APFWFYTSQV LFSRFMNQRN KKKFILARPQ KVTQTLLKFI APEHLPTEYG GVRRNNDEDF SPSDKVSEHK IKGSTVSKVE FPVKELGVTI MWDVTVVGWN
401: VSYKEEFIPD DEGSYSVLLQ NQSVDGSSTR NSFYISEPGK IVITVENGTY KKKKMFYRFT ARTTVPMFFL LQ

Best Arabidopsis Sequence Match ( AT1G30690.1 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.