CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32187	Soybean	cytosol	91.28	90.89
VIT_07s0005g03430.t01	Wine grape	cytosol	46.38	48.55
GSMUA_Achr1P05640_001	Banana	cytosol	37.87	42.89
PGSC0003DMT400026646	Potato	cytosol	38.94	41.12
Solyc09g025230.2.1	Tomato	cytosol	38.09	39.78
KRH11846	Soybean	cytosol	38.51	38.92
KRH36854	Soybean	cytosol	38.09	38.33
KRG99105	Soybean	cytosol	10.85	34.46
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	30.43	33.73
KRH76050	Soybean	cytosol	30.0	33.49
KRH65546	Soybean	cytosol	29.79	33.25
KRH00348	Soybean	cytosol	30.43	32.87
KRH59683	Soybean	cytosol	32.77	28.57
KRH54012	Soybean	nucleus	33.83	28.55
KRH63933	Soybean	plasma membrane	33.19	28.01
KRH41016	Soybean	endoplasmic reticulum	33.4	27.3
KRH44929	Soybean	endoplasmic reticulum	33.4	27.26
KRH23751	Soybean	endoplasmic reticulum	33.19	25.74

Protein Annotations

EntrezGene:100815233	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02008188	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GLYMA_13G123600	UniProt:I1LYK2	InterPro:IPR001251	InterPro:IPR036865
EnsemblPlants:KRH19560	ProteinID:KRH19560	ProteinID:KRH19560.1	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF82	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI000233CA68	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:23679354..23681742

Molecular Weight (calculated)

53965.4 Da

IEP (calculated)

5.832

GRAVY (calculated)

-0.498

Length

470 amino acids

Sequence
(BLAST)

001: MNDANECCCN DEYGEIVVGV PLVINFFDKN NNNDEKSLKV QEKKNQEDHD CDQEDDDDDL DATALGDAGA PSPAEIKLKM KKSLLEFRCK VEDAILGNYL
101: LGEQDHEKLA PQEIAVAREQ IREITLWGVP LLLSKAHEGT DVVLRKFLKA KDFKVNEAFD MLQKTLVWRR ENNVDGITDE DLGSEFGNNA GFLCGKDREG
201: RPVCYHACEI FKDRRVYKKT FGSDNTCDKY LRWRIQMIEK AVKKLCFREG GVESILQVFD LRNTPMQGTK ELNSVSKKAL ILFQNYYPEI IHKNIIVYAP
301: FWFYTSQVLL SGFMNQRNKK KFILARSQKV TQTLLKFIAP EHLPTEYGGL RRNNDEDFSP SDKVSELKIK GSTVSKVEFP IQQLGVTIMW DVTVVGWDVS
401: YKEEFIPDDE GSYTVLLQNQ SVDGSSTRNS FYISEPGKIV ITVENRTYKK KKMFYRSTAR TTVPMFFLLQ

Best Arabidopsis Sequence Match ( AT1G30690.1 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.