CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043169_P001	Maize	cytosol	46.62	32.7
Zm00001d005304_P001	Maize	mitochondrion	50.0	27.21
Zm00001d005249_P001	Maize	mitochondrion	50.68	27.08
GSMUA_Achr2P08100_001	Banana	cytosol	70.27	26.2
HORVU3Hr1G082150.1	Barley	cytosol	60.14	25.87
KRH44929	Soybean	endoplasmic reticulum	93.24	23.96
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	71.62	23.25
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	63.51	22.17
KRH23751	Soybean	endoplasmic reticulum	85.81	20.96
KRH59683	Soybean	cytosol	72.3	19.85
GSMUA_Achr7P23220_001	Banana	cytosol	65.54	19.4
KRH63933	Soybean	plasma membrane	70.95	18.85
KRH54012	Soybean	nucleus	70.27	18.67
KRH41016	Soybean	endoplasmic reticulum	71.62	18.43
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	63.51	18.08
GSMUA_Achr3P22170_001	Banana	cytosol	64.19	18.06
GSMUA_Achr6P18780_001	Banana	cytosol	70.27	17.93
GSMUA_Achr5P25970_001	Banana	cytosol	66.22	17.66
KRH76050	Soybean	cytosol	49.32	17.34
CDY71835	Canola	cytosol	33.11	17.13
VIT_18s0041g00430.t01	Wine grape	cytosol	69.59	17.0
PGSC0003DMT400013297	Potato	cytosol	66.22	16.98
Solyc06g064940.2.1	Tomato	nucleus	66.22	16.9
KRH65546	Soybean	cytosol	47.97	16.86
KRH00348	Soybean	cytosol	49.32	16.78
EES10230	Sorghum	cytosol	57.43	16.6
Zm00001d012254_P003	Maize	mitochondrion	62.16	16.55
OQU78068	Sorghum	cytosol	58.78	16.54
KRH11846	Soybean	cytosol	51.35	16.34
Solyc11g051160.1.1	Tomato	extracellular, plastid	64.19	16.13
KRH36854	Soybean	cytosol	50.68	16.06
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	67.57	16.0
Zm00001d042664_P001	Maize	plasma membrane	61.49	15.94
TraesCS3B01G417500.1	Wheat	golgi	60.81	15.57
TraesCS3A01G385300.1	Wheat	cytosol	60.81	15.57
KXG33790	Sorghum	cytosol	61.49	15.42
TraesCS3D01G378300.1	Wheat	cytosol	60.81	15.33
Os01t0874700-01	Rice	plasma membrane	62.84	15.17
Os05t0429400-01	Rice	plasma membrane	58.78	14.87
TraesCS1A01G268500.1	Wheat	cytosol	60.14	14.59
CDY71842	Canola	cytosol	47.3	14.55
TraesCS1B01G279200.1	Wheat	cytosol	59.46	14.43
TraesCS1D01G268600.1	Wheat	golgi	59.46	14.43
Zm00001d038262_P001	Maize	plasma membrane	60.14	14.35
HORVU3Hr1G082110.2	Barley	plastid	60.14	13.8
CDX68279	Canola	cytosol	48.65	13.56
AT1G72150.1	Thale cress	cytosol	52.03	13.44
Bra008012.1-P	Field mustard	cytosol	50.68	13.35
CDX96377	Canola	cytosol	50.0	13.31
CDY03655	Canola	cytosol	50.68	13.27
Bra016084.1-P	Field mustard	cytosol	50.0	13.26
HORVU1Hr1G075150.4	Barley	plasma membrane	59.46	13.25
CDX82182	Canola	cytosol	51.35	13.22
Bra003892.1-P	Field mustard	cytosol	45.95	13.03
Zm00001d041705_P001	Maize	cytosol, mitochondrion	8.78	12.15
CDY66581	Canola	cytosol	50.0	11.82
CDY21368	Canola	cytosol	51.35	11.66
AT1G22530.1	Thale cress	cytosol	53.38	11.57
KRH32187	Soybean	cytosol	35.14	11.02
KRH19560	Soybean	cytosol	34.46	10.85
Bra040854.1-P	Field mustard	cytosol	51.35	10.76
Zm00001d010205_P002	Maize	cytosol	36.49	10.02
CDY58916	Canola	cytosol	7.43	7.97

Protein Annotations

EMBL:ACUP02010965	EnsemblPlants:KRG99105	EnsemblPlantsGene:GLYMA_18G121200	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	PFAM:PF00650	PFscan:PS50191
ProteinID:KRG99105	ProteinID:KRG99105.1	SMART:SM00516	SUPFAM:SSF52087	UniParc:UPI0006ED7A54	UniProt:A0A0R0F7Q8
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:15223510..15224399

Molecular Weight (calculated)

17483.8 Da

IEP (calculated)

9.847

GRAVY (calculated)

-0.589

Length

148 amino acids

Sequence
(BLAST)

001: RKEFGIEGLV EEDLGIDWDR VVFSHGHDKE GHPVYYNVFG EFEDKELHNK TFWDEEKRNK LIRWMIQSLE KSVRSLDFSP TGISTIVQDN YPEFVAKQIF
101: INVPWWYLAF ARMISPFFTH RTKSKFLFAG PSKSAHTRKV KPKSSKKV

Best Arabidopsis Sequence Match ( AT1G72160.1 )
(BLAST)

001: MAEEPTTTTL VTPEKLPSPS LTPSEVSEST QDALPTETET LEKVTETNPP ETADTTTKPE EETAAEHHPP TVTETETAST EKQEVKDEAS QKEVAEEKKS
101: MIPQNLGSFK EESSKLSDLS NSEKKSLDEL KHLVREALDN HQFTNTPEEV KIWGIPLLED DRSDVVLLKF LRAREFKVKD SFAMLKNTIK WRKEFKIDEL
201: VEEDLVDDLD KVVFMHGHDR EGHPVCYNVY GEFQNKELYN KTFSDEEKRK HFLRTRIQFL ERSIRKLDFS SGGVSTIFQV NDMKNSPGLG KKELRSATKQ
301: AVELLQDNYP EFVFKQAFIN VPWWYLVFYT VIGPFMTPRS KSKLVFAGPS RSAETLFKYI SPEQVPVQYG GLSVDPCDCN PDFSLEDSAS EITVKPGTKQ
401: TVEIIIYEKC ELVWEIRVTG WEVSYKAEFV PEEKDAYTVV IQKPRKMRPS DEPVLTHSFK VNELGKVLLT VDNPTSKKKK LVYRFNVKPL

Arabidopsis Description

PATL3Patellin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Z59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.