CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36854	Soybean	cytosol	93.33	92.93
VIT_10s0003g05480.t01	Wine grape	cytosol	67.53	65.97
Solyc02g070210.2.1	Tomato	cytosol	63.66	62.84
PGSC0003DMT400054383	Potato	cytosol	63.23	62.55
CDY02316	Canola	cytosol	53.55	57.77
Bra023118.1-P	Field mustard	cytosol	60.86	57.64
CDY50723	Canola	nucleus	62.8	55.09
CDX77578	Canola	cytosol	63.01	55.08
Bra026229.1-P	Field mustard	cytosol	62.8	54.89
CDY09549	Canola	nucleus	62.8	54.58
AT1G30690.2	Thale cress	cytosol	62.15	53.52
KRG99105	Soybean	cytosol	16.34	51.35
GSMUA_Achr9P30580_001	Banana	cytosol	59.78	51.1
EER88801	Sorghum	cytosol	54.62	48.66
Zm00001d046995_P001	Maize	plasma membrane	54.19	47.64
KRH76050	Soybean	cytosol	40.65	44.89
HORVU7Hr1G107070.1	Barley	cytosol	51.83	44.55
KRH65546	Soybean	cytosol	40.22	44.42
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	39.78	43.63
KRH00348	Soybean	cytosol	40.0	42.76
TraesCS7A01G466800.1	Wheat	cytosol	50.75	42.52
TraesCS7B01G368100.1	Wheat	nucleus	50.75	41.7
KRH63933	Soybean	plasma membrane	49.89	41.65
TraesCS7D01G454600.1	Wheat	cytosol	50.97	41.43
KRH59683	Soybean	cytosol	47.96	41.37
KRH54012	Soybean	nucleus	49.25	41.11
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	32.04	41.05
KRH41016	Soybean	endoplasmic reticulum	47.96	38.78
KRH19560	Soybean	cytosol	38.92	38.51
KRH32187	Soybean	cytosol	38.71	38.14
KRH44929	Soybean	endoplasmic reticulum	45.59	36.81
KRH23751	Soybean	endoplasmic reticulum	46.67	35.81

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02009243	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G134400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
InterPro:GOLD_dom	UniProt:I1MG81	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	EnsemblPlants:KRH11846
ProteinID:KRH11846	ProteinID:KRH11846.1	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF139	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI000233BB70	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:10795047..10797469

Molecular Weight (calculated)

52759.8 Da

IEP (calculated)

4.902

GRAVY (calculated)

-0.555

Length

465 amino acids

Sequence
(BLAST)

001: MTAEVMAQEE TQAAEVVVAV EPLKEEKVAE ENVKPRESSV EASKPKMVEK SSSYKEESNY LSDLKEFERK ALSELKSKLE EAILGNTLFE PKKEALLENE
101: EKKNEGEEKE EEEEKKVDVE ENDVSLWGVP LLPSKGAEGV DVVLLKFLRA REFKVNDAFE MLKKTLKWRK ESKIDSAVDE DFGSDLASAA YMNGVDHEGH
201: PVCYNIFGAF ESEELYQKTF GTEEKRSEFL RWRCQLMEKG IQKLNLKPGG VSSLLQINDL KNSPGPSKLR VATKQTLAML QDNYPEMVAK NIFINVPFWY
301: YALNALLSPF LTQRTKSKFV VARPNKVTET LTKYIPIEEI PLHYGGFKRE NDSEFSSQDG AVSELILKAG STATIEVPAL EVGNSLCWDL TVLGWEVSYK
401: EEFVPTDEGS YTVIVQKGKK MGSQEWPLRN TFMNSEPGKV VLTIENTSNK KKRVLYRYKT IKSSF

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.