Factsheet for Os06t0671800-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid, secretory
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88801	Sorghum	cytosol	70.25	48.85
Zm00001d046995_P001	Maize	plasma membrane	66.94	45.94
HORVU7Hr1G107070.1	Barley	cytosol	65.56	43.99
TraesCS7B01G368100.1	Wheat	nucleus	66.39	42.58
TraesCS7D01G454600.1	Wheat	cytosol	66.94	42.48
TraesCS7A01G466800.1	Wheat	cytosol	64.74	42.34
VIT_10s0003g05480.t01	Wine grape	cytosol	42.98	32.77
PGSC0003DMT400054383	Potato	cytosol	42.42	32.77
Solyc02g070210.2.1	Tomato	cytosol	42.42	32.7
KRH11846	Soybean	cytosol	41.05	32.04
GSMUA_Achr9P30580_001	Banana	cytosol	47.38	31.62
KRH36854	Soybean	cytosol	40.5	31.48
Bra026229.1-P	Field mustard	cytosol	44.08	30.08
CDX77578	Canola	cytosol	44.08	30.08
CDY09549	Canola	nucleus	43.25	29.35
Bra023118.1-P	Field mustard	cytosol	39.12	28.92
AT1G30690.2	Thale cress	cytosol	42.98	28.89
CDY50723	Canola	nucleus	41.6	28.49
VIT_19s0085g00280.t01	Wine grape	cytosol	42.98	27.66
CDY02316	Canola	cytosol	32.78	27.61
Os05t0345100-00	Rice	plastid	21.49	25.0
Os05t0429400-01	Rice	plasma membrane	36.91	22.91
Os01t0874700-01	Rice	plasma membrane	37.47	22.19
Os05t0345175-01	Rice	cytosol	0.28	1.27

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A0P0WZV9	ProteinID:BAS99084.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001251
InterPro:IPR036865	EnsemblPlantsGene:Os06g0671800	EnsemblPlants:Os06t0671800-01	PFAM:PF00650	PFAM:PF03765	PANTHER:PTHR23324
PANTHER:PTHR23324:SF98	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0001C7C145	SEG:seg

Description

Similar to patellin-5. (Os06t0671800-01)

Coordinates

chr6:+:27875114..27878195

Molecular Weight (calculated)

39692.3 Da

IEP (calculated)

4.338

GRAVY (calculated)

-0.578

Length

363 amino acids

Sequence
(BLAST)

001: MAVEVVSEGA AAAAAEVAAP ETKEVTAKAA ADEAVTLAAV VSKNASFREE SNFLDDLKDG ERKALAELRA KVEEAIVDGK LFDDGKVEAK KKAAAAEEEK
101: AVEEAAGEKK DGEEKKEEEE PVTEEKKEEE QGEEEEEPKK EEADEGEKEE KPAEEEAAAV VDKDIALWGV PLLPSKGDDA TDVVLLKFLR ARDFKAGAAF
201: DMLRKTLHWR REWKGFAAGT DDDDDGEALP AELADACYLD GADREGHPVC YNALGVFADD AVYKKALGTE EGKARFLRWR VRAMESHVAK LDLRPGGVAS
301: LLQVTDLKNS PGPAKKDLRV AMKQVLDLFQ DNYPELVARN VSTPCDFNKF LFLPNLDPNV CRI

Best Arabidopsis Sequence Match ( AT1G30690.2 )
(BLAST)

001: MTAEVKVEEK QVESEVVIAP AVVPEETTVK AVVEETKVEE DESKPEGVEK SASFKEESDF FADLKESEKK ALSDLKSKLE EAIVDNTLLK TKKKESSPMK
101: EKKEEVVKPE AEVEKKKEEA AEEKVEEEKK SEAVVTEEAP KAETVEAVVT EEIIPKEEVT TVVEKVEEET KEEEKKTEDV VTEEVKAETI EVEDEDESVD
201: KDIELWGVPL LPSKGAESTD VILLKFLRAR DFKVNEAFEM LKKTLKWRKQ NKIDSILGEE FGEDLATAAY MNGVDRESHP VCYNVHSEEL YQTIGSEKNR
301: EKFLRWRFQL MEKGIQKLNL KPGGVTSLLQ IHDLKNAPGV SRTEIWVGIK KVIETLQDNY PEFVSRNIFI NVPFWFYAMR AVLSPFLTQR TKSKFVVARP
401: AKVRETLLKY IPADELPVQY GGFKTVDDTE FSNETVSEVV VKPGSSETIE IPAPETEGTL VWDIAVLGWE VNYKEEFVPT EEGAYTVIVQ KVKKMGANEG
501: PIRNSFKNSQ AGKIVLTVDN VSGKKKKVLY RYRTKTESSS

Arabidopsis Description

PATL4Patellin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q94C59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.