Factsheet for Os05t0345100-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052665_P001	Maize	cytosol	49.68	76.73
EES18028	Sorghum	plastid	83.97	60.79
TraesCS1A01G198900.1	Wheat	plastid	82.37	60.76
TraesCS1B01G213900.1	Wheat	plastid	82.37	60.76
TraesCS1D01G202700.1	Wheat	plastid	82.05	60.52
Zm00001d038005_P001	Maize	mitochondrion, plastid	80.45	58.64
CDX73635	Canola	cytosol, plastid	45.83	51.62
CDX78958	Canola	cytosol, plastid	45.83	51.62
CDY13832	Canola	cytosol, plastid	45.83	51.62
CDY29572	Canola	cytosol, plastid	45.83	51.62
Zm00001d010049_P001	Maize	plastid	81.73	50.8
GSMUA_Achr5P07450_001	Banana	plastid	63.46	50.0
GSMUA_Achr2P18920_001	Banana	plastid	67.31	49.76
GSMUA_Achr9P17890_001	Banana	cytosol	60.26	47.72
GSMUA_Achr3P09950_001	Banana	plastid	64.1	47.17
CDX78026	Canola	cytosol, plastid	58.33	44.17
Bra036782.1-P	Field mustard	cytosol, plastid	58.33	44.17
Solyc09g015080.2.1	Tomato	cytosol, plastid	59.62	43.87
CDX73705	Canola	cytosol, plastid	57.69	43.69
PGSC0003DMT400030364	Potato	plastid	59.62	43.66
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	60.9	42.32
KRH76050	Soybean	cytosol	57.05	42.28
AT3G51670.1	Thale cress	cytosol	55.13	42.05
KRH65546	Soybean	cytosol	56.73	42.04
KRH00348	Soybean	cytosol	58.01	41.61
VIT_01s0137g00470.t01	Wine grape	cytosol	19.87	40.52
CDX90637	Canola	cytosol	49.68	38.56
Bra012843.1-P	Field mustard	cytosol	53.53	37.78
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	49.04	25.67
Os06t0671800-01	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	25.0	21.49
Os05t0429400-01	Rice	plasma membrane	39.1	20.85
Os01t0874700-01	Rice	plasma membrane	39.42	20.07
HORVU1Hr1G051510.3	Barley	plastid	28.21	18.8
Os05t0345175-01	Rice	cytosol	0.96	3.8

Protein Annotations

EnsemblPlants:Os05t0345100-00	EnsemblPlantsGene:Os05g0345100	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF57	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	ProteinID:BAS93487.1	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000393AAF2	UniProt:A0A0P0WL29	MapMan:35.1	:

Description

Similar to patellin-5. (Os05t0345100-00)

Coordinates

chr5:+:16216665..16217960

Molecular Weight (calculated)

34247.3 Da

IEP (calculated)

6.528

GRAVY (calculated)

-0.027

Length

312 amino acids

Sequence
(BLAST)

001: MSPTATPSPA PAAVAAAPKP PPSGTGAKRS LMSSLMEATA LLRSSSFKED SYVASALPAS DLRALADLRA LLSTHPDPIS IWGVPLNPAP PQGGEGAPAP
101: AAAADERADV VLLKFLRARD FRVRDAHAML LRCAAWRAEF RADAVLDEDL GFKDLEGVVA YMHGWDREGH PVTDLKDMPK RELRAASNQI LSLFQDNYPE
201: MVARKVFINV PWYFSVLFSM ISPFLTERTK SKFVIAREGN VAETLFKFIR PELVPVQYGG LSRAGDLENG PPKPASEFTI KGGEKVFLEI DGIEVLHFLL
301: LIIIFPHWEL RF

Best Arabidopsis Sequence Match ( AT3G51670.1 )
(BLAST)

001: MDASLSPFDH QKTQNTEPKK SFITSLITLR SNNIKEDTYF VSELKPTEQK SLQELKEKLS ASSSKASSMW GVSLLGGDDK ADVILLKFLR ARDFKVADSL
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV

Arabidopsis Description

PATL6Patellin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.