Factsheet for HORVU1Hr1G051510.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0345175-01	Rice	cytosol	15.81	93.67
TraesCS1D01G202700.1	Wheat	plastid	39.74	43.97
TraesCS1A01G198900.1	Wheat	plastid	39.53	43.74
TraesCS1B01G213900.1	Wheat	plastid	39.53	43.74
EES18028	Sorghum	plastid	38.03	41.3
Zm00001d052665_P001	Maize	cytosol	17.73	41.09
Zm00001d038005_P001	Maize	mitochondrion, plastid	37.18	40.65
GSMUA_Achr5P07450_001	Banana	plastid	33.12	39.14
GSMUA_Achr9P17890_001	Banana	cytosol	32.91	39.09
GSMUA_Achr3P09950_001	Banana	plastid	33.55	37.03
GSMUA_Achr2P18920_001	Banana	plastid	33.33	36.97
Zm00001d010049_P001	Maize	plastid	37.61	35.06
KRH00348	Soybean	cytosol	32.05	34.48
KRH65546	Soybean	cytosol	30.77	34.2
CDX78026	Canola	cytosol, plastid	29.7	33.74
Bra036782.1-P	Field mustard	cytosol, plastid	29.7	33.74
KRH76050	Soybean	cytosol	30.13	33.49
PGSC0003DMT400030364	Potato	plastid	30.34	33.33
Solyc09g015080.2.1	Tomato	cytosol, plastid	30.13	33.25
CDX73705	Canola	cytosol, plastid	29.27	33.25
AT3G51670.1	Thale cress	cytosol	28.85	33.01
CDX90637	Canola	cytosol	28.21	32.84
VIT_08s0058g00640.t01	Wine grape	cytosol, mitochondrion, nucleus	30.98	32.29
Bra012843.1-P	Field mustard	cytosol	30.13	31.9
Os05t0345100-00	Rice	plastid	18.8	28.21
HORVU3Hr1G082150.1	Barley	cytosol	19.23	26.16
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	27.56	21.64
VIT_01s0137g00470.t01	Wine grape	cytosol	7.05	21.57
CDY29572	Canola	cytosol, plastid	10.68	18.05
CDY13832	Canola	cytosol, plastid	10.68	18.05
CDX78958	Canola	cytosol, plastid	10.68	18.05
CDX73635	Canola	cytosol, plastid	10.68	18.05
HORVU7Hr1G107070.1	Barley	cytosol	20.73	17.93
HORVU3Hr1G082110.2	Barley	plastid	20.09	14.57
HORVU1Hr1G075150.4	Barley	plasma membrane	19.87	14.01

Protein Annotations

EnsemblPlants:HORVU1Hr1G051510.3	EnsemblPlantsGene:HORVU1Hr1G051510	InterPro:GOLD_dom	InterPro:GOLD_dom_sf	InterPro:IPR009038	PANTHER:PTHR23324
PANTHER:PTHR23324:SF57	PFscan:PS50866	SEG:seg	SUPFAM:SSF101576	UniParc:UPI000B4628CE	UniProt:A0A287FJV6
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:382064395..382067861

Molecular Weight (calculated)

51925.7 Da

IEP (calculated)

12.556

GRAVY (calculated)

-0.867

Length

468 amino acids

Sequence
(BLAST)

001: SGRRPHHAHA TIITPLPRST QTSVAFHFKY ATFRPLHFHQ SLHVSDHHRV PRARAGAGNR RAAEAFGRRE AQPDGVPHRR HSAAPGGLLQ GGLVRGGGAP
101: VLGPPRARRP QGAPGHPPGP NLHLGRAAQP AQRLPRRRAH RRRAPQVPPR QGLPRPRRAR HAAPLRRLAG RVPRRRRAGR GPWVQGPRGH RRLHARLGPR
201: RPPRLLQRLR RLQGPGHVRP GVRRRRPPLP VPPVARPDHG ARRARAPAPP RRRQRHHTGH RPQGHAEARA PRRVQPDTLP LPGQLPRDGR PQGVRERAVV
301: LLRAVLHDLA LPHGAHQEQV RHRARGQRRG DALQVFIRPE LVPVQYGGLS RASELENGPP KPASEFTIKG GEKVFLEIDG IEAGATITWD LVVGGWELEY
401: GAEYVPAAEG GYTLCVERTR KVPAAADEPV HNTFTAKEPG KMVLSIDNSG SRKRKVAAYR YFVRKPSA

Best Arabidopsis Sequence Match ( AT3G51670.1 )
(BLAST)

001: MDASLSPFDH QKTQNTEPKK SFITSLITLR SNNIKEDTYF VSELKPTEQK SLQELKEKLS ASSSKASSMW GVSLLGGDDK ADVILLKFLR ARDFKVADSL
101: RMLEKCLEWR EEFKAEKLTE EDLGFKDLEG KVAYMRGYDK EGHPVCYNAY GVFKEKEMYE RVFGDEEKLN KFLRWRVQVL ERGVKMLHFK PGGVNSIIQV
201: TDLKDMPKRE LRVASNQILS LFQDNYPELV ATKIFINVPW YFSVIYSMFS PFLTQRTKSK FVMSKEGNAA ETLYKFIRPE DIPVQYGGLS RPTDSQNGPP
301: KPASEFSIKG GEKVNIQIEG IEGGATITWD IVVGGWDLEY SAEFVPNAEE SYAIVVEKPK KMKATDEAVC NSFTTVEAGK LILSVDNTLS RKKKVAAYRY
401: TVRKSTTTV

Arabidopsis Description

PATL6Patellin-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.