Factsheet for HORVU3Hr1G082150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G045920.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72160.1	HORVU5Hr1G045920.2	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g09040.t01	Wine grape	cytosol	21.51	64.91
KRG99105	Soybean	cytosol	25.87	60.14
TraesCS3A01G385300.1	Wheat	cytosol	98.55	58.65
TraesCS3B01G417500.1	Wheat	golgi	98.26	58.48
TraesCS3D01G378300.1	Wheat	cytosol	98.26	57.58
Bra000675.1-P	Field mustard	cytosol	50.58	56.13
CDX90715	Canola	cytosol	49.42	54.84
Zm00001d012254_P003	Maize	mitochondrion	88.37	54.68
HORVU3Hr1G082110.2	Barley	plastid	100.0	53.33
Zm00001d042664_P001	Maize	plasma membrane	88.37	53.24
KXG33790	Sorghum	cytosol	89.53	52.2
Os01t0874700-01	Rice	plasma membrane	92.15	51.71
EES10230	Sorghum	cytosol	74.71	50.2
GSMUA_Achr7P23220_001	Banana	cytosol	72.38	49.8
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	59.88	48.58
GSMUA_Achr3P22170_001	Banana	cytosol	70.35	46.01
CDY58916	Canola	cytosol	18.31	45.65
GSMUA_Achr5P25970_001	Banana	cytosol	72.38	44.86
GSMUA_Achr6P18780_001	Banana	cytosol	74.42	44.14
HORVU1Hr1G075150.4	Barley	plasma membrane	84.3	43.67
VIT_05s0029g01570.t01	Wine grape	cytosol	50.87	43.53
Solyc11g027880.1.1	Tomato	cytosol, endoplasmic reticulum, plastid	61.05	42.86
PGSC0003DMT400065886	Potato	cytosol	61.05	42.77
VIT_07s0031g03220.t01	Wine grape	cytosol	62.21	41.0
AT1G72160.1	Thale cress	nucleus	57.27	40.2
CDY50441	Canola	plasma membrane	56.4	40.0
KRH59683	Soybean	cytosol	62.5	39.89
CDY03654	Canola	nucleus	56.69	39.88
CDX82180	Canola	nucleus	56.4	39.67
Bra008013.1-P	Field mustard	nucleus	56.69	39.31
KRH54012	Soybean	nucleus	62.79	38.78
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	70.35	38.72
KRH63933	Soybean	plasma membrane	62.5	38.6
Bra003891.1-P	Field mustard	cytosol	56.1	38.29
CDX68278	Canola	cytosol	47.97	37.59
KRH41016	Soybean	endoplasmic reticulum	62.5	37.39
VIT_18s0041g00420.t01	Wine grape	cytosol	62.79	37.11
KRH44929	Soybean	endoplasmic reticulum	61.63	36.81
PGSC0003DMT400013297	Potato	cytosol	60.17	35.88
Solyc06g064940.2.1	Tomato	nucleus	60.17	35.69
KRH23751	Soybean	endoplasmic reticulum	62.5	35.48
Solyc11g051160.1.1	Tomato	extracellular, plastid	59.01	34.47
VIT_18s0041g00430.t01	Wine grape	cytosol	60.17	34.16
CDY71835	Canola	cytosol	27.62	33.22
CDX68279	Canola	cytosol	48.55	31.45
CDY03655	Canola	cytosol	51.45	31.33
Bra008012.1-P	Field mustard	cytosol	51.16	31.32
CDX96377	Canola	cytosol	50.58	31.3
Bra016084.1-P	Field mustard	cytosol	50.29	31.0
AT1G72150.1	Thale cress	cytosol	50.29	30.19
CDX82182	Canola	cytosol	50.29	30.09
Bra003892.1-P	Field mustard	cytosol	45.06	29.69
HORVU7Hr1G107070.1	Barley	cytosol	46.51	29.57
AT4G09160.1	Thale cress	cytosol	56.1	28.89
CDY05051	Canola	nucleus	56.4	27.95
CDY71842	Canola	cytosol	38.37	27.44
AT1G22530.1	Thale cress	cytosol	52.03	26.21
Bra040854.1-P	Field mustard	cytosol	51.16	24.93
CDY21368	Canola	cytosol	46.22	24.39
CDY66581	Canola	cytosol	42.44	23.32
HORVU1Hr1G051510.3	Barley	plastid	26.16	19.23

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A287LY70	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:GOLD_dom	InterPro:GOLD_dom_sf	EnsemblPlantsGene:HORVU3Hr1G082150	EnsemblPlants:HORVU3Hr1G082150.1	InterPro:IPR001251
InterPro:IPR009038	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF143	SMART:SM00516	SMART:SM01100	SUPFAM:SSF101576
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000B473E0E	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:597790977..597792942

Molecular Weight (calculated)

38962.8 Da

IEP (calculated)

8.567

GRAVY (calculated)

-0.274

Length

344 amino acids

Sequence
(BLAST)

001: APEPVFIWGV PLVGDDERTD AVLLKFLRAR EFKVKEAMAM LRSAVLWRKR FGIESLLEAD LAFPELEKVV FYRGADREGH PVCYNVYGEF QDKEVYEKAF
101: GDEEKRERFL KWRIQLLERG ILSQLDFAPS GTCSMVQVTD LKNSPPMLGK HRAVTRQAVA LLQDNYPEFI AKKVFINVPW WYLAANKMMS PFLTQRTKSK
201: FVFASQAKSP ETLFRYIAPE QVPVQFGGLF KEDDPDFTTS DSVTELTIKA SSKEAIEIPV TENSTIVWEL RVLGWEVSYG AEFTPDAEGA YTVTRKVPAN
301: EEPIMKGSFK ASEAGKIVLT ISNAASKKKK LLYRSKVKSS GESV

Best Arabidopsis Sequence Match ( AT1G72160.1 )
(BLAST)

001: MAEEPTTTTL VTPEKLPSPS LTPSEVSEST QDALPTETET LEKVTETNPP ETADTTTKPE EETAAEHHPP TVTETETAST EKQEVKDEAS QKEVAEEKKS
101: MIPQNLGSFK EESSKLSDLS NSEKKSLDEL KHLVREALDN HQFTNTPEEV KIWGIPLLED DRSDVVLLKF LRAREFKVKD SFAMLKNTIK WRKEFKIDEL
201: VEEDLVDDLD KVVFMHGHDR EGHPVCYNVY GEFQNKELYN KTFSDEEKRK HFLRTRIQFL ERSIRKLDFS SGGVSTIFQV NDMKNSPGLG KKELRSATKQ
301: AVELLQDNYP EFVFKQAFIN VPWWYLVFYT VIGPFMTPRS KSKLVFAGPS RSAETLFKYI SPEQVPVQYG GLSVDPCDCN PDFSLEDSAS EITVKPGTKQ
401: TVEIIIYEKC ELVWEIRVTG WEVSYKAEFV PEEKDAYTVV IQKPRKMRPS DEPVLTHSFK VNELGKVLLT VDNPTSKKKK LVYRFNVKPL

Arabidopsis Description

PATL3Patellin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Z59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.