CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000675.1-P	Field mustard	cytosol	98.39	98.39
VIT_09s0002g09040.t01	Wine grape	cytosol	29.68	80.7
Zm00001d041705_P001	Maize	cytosol, mitochondrion	19.03	55.14
Zm00001d005249_P001	Maize	mitochondrion	47.74	53.43
CDY58916	Canola	cytosol	23.23	52.17
Zm00001d043169_P001	Maize	cytosol	35.16	51.66
KRH23753	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	70.32	51.42
Zm00001d005304_P001	Maize	mitochondrion	44.19	50.37
HORVU3Hr1G082150.1	Barley	cytosol	54.84	49.42
GSMUA_Achr2P08100_001	Banana	cytosol	63.23	49.37
CDY50441	Canola	plasma membrane	74.84	47.84
CDX82180	Canola	nucleus	75.16	47.65
CDY03654	Canola	nucleus	74.84	47.44
Solyc11g027880.1.1	Tomato	cytosol, endoplasmic reticulum, plastid	72.9	46.12
PGSC0003DMT400065886	Potato	cytosol	72.9	46.03
CDY05051	Canola	nucleus	98.39	43.95
CDX68278	Canola	cytosol	61.61	43.51
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	61.94	42.11
AT4G09160.1	Thale cress	cytosol	90.0	41.77
VIT_05s0029g01570.t01	Wine grape	cytosol	52.9	40.8
GSMUA_Achr7P23220_001	Banana	cytosol	60.65	37.6
VIT_18s0041g00420.t01	Wine grape	cytosol	70.0	37.29
CDX78026	Canola	cytosol, plastid	48.06	36.16
CDX73705	Canola	cytosol, plastid	47.74	35.92
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	59.03	35.19
GSMUA_Achr3P22170_001	Banana	cytosol	58.39	34.41
GSMUA_Achr5P25970_001	Banana	cytosol	60.32	33.69
CDX90637	Canola	cytosol	43.55	33.58
CDX78958	Canola	cytosol, plastid	29.68	33.21
CDX73635	Canola	cytosol, plastid	29.68	33.21
CDY29572	Canola	cytosol, plastid	29.68	33.21
CDY13832	Canola	cytosol, plastid	29.68	33.21
GSMUA_Achr6P18780_001	Banana	cytosol	61.61	32.93
Zm00001d012254_P003	Maize	mitochondrion	58.39	32.55
CDY02316	Canola	cytosol	45.16	32.48
OQU78068	Sorghum	cytosol	54.52	32.13
Zm00001d042664_P001	Maize	plasma membrane	57.74	31.35
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	61.94	30.72
KXG33790	Sorghum	cytosol	58.39	30.68
Os05t0429400-01	Rice	plasma membrane	57.74	30.6
EES10230	Sorghum	cytosol	50.32	30.47
TraesCS3A01G385300.1	Wheat	cytosol	56.13	30.1
TraesCS3B01G417500.1	Wheat	golgi	56.13	30.1
TraesCS3D01G378300.1	Wheat	cytosol	56.45	29.81
Os01t0874700-01	Rice	plasma membrane	58.71	29.69
TraesCS1A01G268500.1	Wheat	cytosol	57.42	29.18
TraesCS1B01G279200.1	Wheat	cytosol	57.42	29.18
TraesCS1D01G268600.1	Wheat	golgi	57.42	29.18
Zm00001d038262_P001	Maize	plasma membrane	57.74	28.87
CDX77578	Canola	cytosol	47.74	27.82
CDY50723	Canola	nucleus	47.42	27.74
CDX68279	Canola	cytosol	46.77	27.31
CDY09549	Canola	nucleus	47.1	27.29
HORVU1Hr1G075150.4	Barley	plasma membrane	57.74	26.96
HORVU3Hr1G082110.2	Barley	plastid	55.81	26.82
CDX96377	Canola	cytosol	47.74	26.62
CDY03655	Canola	cytosol	46.13	25.31
CDX82182	Canola	cytosol	46.45	25.04
Zm00001d010205_P002	Maize	cytosol	41.94	24.12
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	42.9	22.32
CDY71842	Canola	cytosol	33.87	21.83
CDY71835	Canola	cytosol	20.0	21.68
CDY21368	Canola	cytosol	42.9	20.4
CDY66581	Canola	cytosol	37.74	18.69

Protein Annotations

EnsemblPlants:CDX90715	EnsemblPlantsGene:GSBRNA2T00151391001	Gene3D:3.40.525.10	GO:A0A078DND8	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:GOLD_dom	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF48
PFAM:PF00650	PFscan:PS50191	PFscan:PS50866	ProteinID:CDX90715	ProteinID:CDX90715.1	SMART:SM00516
SUPFAM:SSF52087	UniParc:UPI0004EE8CE1	MapMan:35.1	:	:	:

Description

BnaA03g23950D

Coordinates

chrLK031864:+:114910..117731

Molecular Weight (calculated)

35977.2 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.398

Length

310 amino acids

Sequence
(BLAST)

001: MLTKTLQWRM EFNIEELLDE NLGDHLDKVV FMQGQDRENH PVCYNVYGEF QDKDLYQKTF SDEEKRDRFL RWRVQFLEKS IRKLDFVAGG VSTICQVNDL
101: KNSPGPGKTE LRVATKQALH LLQDNYPEFI SKQIFINVPW WYLAFYRIIS PFMTQRSKSK LVFSGPSRSA ETLFKYISPE HVPVQYGGLS VDNCDCNSDF
201: THEDTATEIT VKPTTKQTVE IIIYERCTIV WEIRVVGWEV MYGAEFVPEN KEGYTVIIQK PRKMASGDEP VVSQSFKVGE VGKILLSVDN PTSNKKILIY
301: RFKVKPLPCE

Best Arabidopsis Sequence Match ( AT4G09160.1 )
(BLAST)

001: MSQDSATTTP PPPLTSDVSM PSGEEDEPKH VTSEEEAPVT SETNLKLPLM PELEESNHTA EVVSEKVTPE TMTLESEGLN HAAEDSEQTH EVTPETETAK
101: LEVLNHTAED SEQTHEVTPE KETVKSEFLN HVAEDSEQTH EVTPETETVK SEVLNHAAED SEQPRGVTPT PETETSEADT SLLVTSETEE PNHAAEDYSE
201: TEPSQKLMLE QRRKYMEVED WTEPELPDEA VLEAAASVPE PKQPEPQTPP PPPSTTTSTV ASRSLAEMMN REEAEVEEKQ KIQIPRSLGS FKEETNKISD
301: LSETELNALQ ELRHLLQVSQ DSSKTSIWGV PLLKDDRTDV VLLKFLRARD FKPQEAYSML NKTLQWRIDF NIEELLDENL GDDLDKVVFM QGQDKENHPV
401: CYNVYGEFQN KDLYQKTFSD EEKRERFLRW RIQFLEKSIR NLDFVAGGVS TICQVNDLKN SPGPGKTELR LATKQALHLL QDNYPEFVSK QIFINVPWWY
501: LAFYRIISPF MSQRSKSKLV FAGPSRSAET LLKYISPEHV PVQYGGLSVD NCECNSDFTH DDIATEITVK PTTKQTVEII VYEKCTIVWE IRVVGWEVSY
601: GAEFVPENKE GYTVIIQKPR KMTAKNELVV SHSFKVGEVG RILLTVDNPT STKKMLIYRF KVKPLACE

Arabidopsis Description

PATL5Patellin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.