CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58916	Canola	cytosol	25.42	97.83
Bra003892.1-P	Field mustard	cytosol	93.97	95.59
CDY71835	Canola	cytosol	46.89	87.06
CDX96377	Canola	cytosol	88.32	84.35
CDY71842	Canola	cytosol	74.58	82.33
CDY03655	Canola	cytosol	85.69	80.53
CDX82182	Canola	cytosol	85.31	78.78
AT1G72150.1	Thale cress	cytosol	82.49	76.44
GSMUA_Achr2P08100_001	Banana	cytosol	40.3	53.9
CDY21368	Canola	cytosol	65.16	53.07
CDY66581	Canola	cytosol	61.58	52.24
KRG99105	Soybean	cytosol	13.56	48.65
HORVU3Hr1G082150.1	Barley	cytosol	31.45	48.55
CDX90715	Canola	cytosol	27.31	46.77
Zm00001d041705_P001	Maize	cytosol, mitochondrion	9.42	46.73
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	40.11	46.71
GSMUA_Achr7P23220_001	Banana	cytosol	43.88	46.6
Zm00001d005304_P001	Maize	mitochondrion	23.16	45.22
Zm00001d005249_P001	Maize	mitochondrion	23.54	45.13
Solyc11g051160.1.1	Tomato	extracellular, plastid	49.34	44.48
PGSC0003DMT400013297	Potato	cytosol	47.46	43.67
Solyc06g064940.2.1	Tomato	nucleus	47.65	43.62
CDY03654	Canola	nucleus	39.55	42.94
GSMUA_Achr6P18780_001	Banana	cytosol	46.7	42.76
CDX82180	Canola	nucleus	39.36	42.74
VIT_18s0041g00430.t01	Wine grape	cytosol	48.78	42.74
CDY50441	Canola	plasma membrane	38.98	42.68
Zm00001d012254_P003	Maize	mitochondrion	44.63	42.63
KRH44929	Soybean	endoplasmic reticulum	45.57	42.01
KRH23751	Soybean	endoplasmic reticulum	47.83	41.91
GSMUA_Achr5P25970_001	Banana	cytosol	43.69	41.8
CDX68278	Canola	cytosol	33.71	40.77
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	39.92	40.77
Zm00001d043169_P001	Maize	cytosol	16.2	40.76
Zm00001d042664_P001	Maize	plasma membrane	42.94	39.93
KXG33790	Sorghum	cytosol	44.26	39.83
Os05t0429400-01	Rice	plasma membrane	43.69	39.66
GSMUA_Achr3P22170_001	Banana	cytosol	39.17	39.54
TraesCS3B01G417500.1	Wheat	golgi	42.56	39.1
TraesCS3A01G385300.1	Wheat	cytosol	42.37	38.93
EES10230	Sorghum	cytosol	37.48	38.87
Os01t0874700-01	Rice	plasma membrane	44.82	38.83
TraesCS3D01G378300.1	Wheat	cytosol	42.37	38.33
OQU78068	Sorghum	cytosol	37.66	38.02
Zm00001d038262_P001	Maize	plasma membrane	43.5	37.26
TraesCS1B01G279200.1	Wheat	cytosol	42.37	36.89
CDX73635	Canola	cytosol, plastid	19.21	36.82
CDY13832	Canola	cytosol, plastid	19.21	36.82
CDY29572	Canola	cytosol, plastid	19.21	36.82
CDX78958	Canola	cytosol, plastid	19.21	36.82
TraesCS1D01G268600.1	Wheat	golgi	42.18	36.72
TraesCS1A01G268500.1	Wheat	cytosol	41.62	36.23
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	42.56	36.16
CDX78026	Canola	cytosol, plastid	27.68	35.68
Zm00001d010205_P002	Maize	cytosol	36.16	35.62
CDX73705	Canola	cytosol, plastid	27.5	35.44
CDX90637	Canola	cytosol	26.37	34.83
HORVU3Hr1G082110.2	Barley	plastid	42.0	34.57
CDY02316	Canola	cytosol	27.68	34.11
HORVU1Hr1G075150.4	Barley	plasma membrane	41.62	33.28
CDX77578	Canola	cytosol	33.15	33.08
CDY09549	Canola	nucleus	33.15	32.9
CDY50723	Canola	nucleus	32.77	32.83
CDY05051	Canola	nucleus	35.4	27.09
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	26.18	23.32

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078BWX0	EnsemblPlants:CDX68279	ProteinID:CDX68279	ProteinID:CDX68279.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:GOLD_dom	InterPro:GOLD_dom_sf
EnsemblPlantsGene:GSBRNA2T00099560001	InterPro:IPR001251	InterPro:IPR009038	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PFscan:PS50191	PFscan:PS50866	PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	SMART:SM00516	SMART:SM01100
SUPFAM:SSF101576	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0004EE0BD9	SEG:seg	:

Description

BnaA07g23190D

Coordinates

chrLK031787:-:4773296..4775787

Molecular Weight (calculated)

59786.6 Da

IEP (calculated)

4.595

GRAVY (calculated)

-0.567

Length

531 amino acids

Sequence
(BLAST)

001: MAQEEAHKTA DVVVTAAEKP MTDKEVTVPP PVAEKDVTPT VASGEKAESE KEEEETVVAE KVIVPSPEEL EKKALAEFKE LVREALNKRE FTSPAPVKEE
101: KPEEKKPAEE TKGEDKTEEK KEEEKPEAIK LEEKTDAVAP AETKSEEKEA VSATEKDSSV EEDGTKTVEA IEESIVSVTP PENTVVSEAE PMEPEEVSIY
201: GVPLLQDERS DVILLKFLRA RDFKVKDALT MLKNTVQWRK ENKIDELVEE ASEFEKMVFA HGVDKEGHVV IYSSYGEFQN KELFSDKEKL NKFLNWRIQL
301: QEKCVRALDF SSPDAKSSFV FVSDFRNAPG LGKRALWQFI RRAVKQFEDN YPEFASRELF INVPWWYIPY YKTFGSIITS PRTRSKMVLA GPSKSTDAIF
401: KYISPEQVPV KYGGLSKDIP IATEDTVTEA IVKPAAKYTI DLPASDACML SWELRVLGAD VSYGAQFEPT TEGNYAVIVS KNRRIESTDE PVITESFKVG
501: EPGKIVITID NQTSKKKKVL YRFKTLPISD L

Best Arabidopsis Sequence Match ( AT1G72150.1 )
(BLAST)

001: MAQEEVQKSA DVAAAPVVKE KPITDKEVTI PTPVAEKEEV AAPVSDEKAV PEKEVTPEKE APAAEAEKSV SVKEEETVVV AEKVVVLTAE EVQKKALEEF
101: KELVREALNK REFTAPVTPV KEEKTEEKKT EEETKEEEKT EEKKEETTTE VKVEEEKPAV PAAEEEKSSE AAPVETKSEE KPEEKAEVTT EKASSAEEDG
201: TKTVEAIEES IVSVSPPESA VAPVVVETVA VAEAEPVEPE EVSIWGVPLL QDERSDVILT KFLRARDFKV KEALTMLKNT VQWRKENKID ELVESGEEVS
301: EFEKMVFAHG VDKEGHVVIY SSYGEFQNKE LFSDKEKLNK FLSWRIQLQE KCVRAIDFSN PEAKSSFVFV SDFRNAPGLG KRALWQFIRR AVKQFEDNYP
401: EFAAKELFIN VPWWYIPYYK TFGSIITSPR TRSKMVLAGP SKSADTIFKY IAPEQVPVKY GGLSKDTPLT EETITEAIVK PAANYTIELP ASEACTLSWE
501: LRVLGADVSY GAQFEPTTEG SYAVIVSKTR KIGSTDEPVI TDSFKVGEPG KIVITIDNQT SKKKKVLYRF KTQ

Arabidopsis Description

PATL1Patellin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WK6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.