Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008012.1-P | Field mustard | cytosol | 98.58 | 99.11 |
| CDX82182 | Canola | cytosol | 94.87 | 93.22 |
| CDY71842 | Canola | cytosol | 74.87 | 87.94 |
| CDX96377 | Canola | cytosol | 86.37 | 87.77 |
| CDY71835 | Canola | cytosol | 44.07 | 87.06 |
| CDX68279 | Canola | cytosol | 80.53 | 85.69 |
| CDY58916 | Canola | cytosol | 20.53 | 84.06 |
| AT1G72150.1 | Thale cress | cytosol | 82.12 | 80.98 |
| CDY21368 | Canola | cytosol | 64.42 | 55.83 |
| GSMUA_Achr2P08100_001 | Banana | cytosol | 39.12 | 55.67 |
| CDY66581 | Canola | cytosol | 60.53 | 54.63 |
| HORVU3Hr1G082150.1 | Barley | cytosol | 31.33 | 51.45 |
| KRG99105 | Soybean | cytosol | 13.27 | 50.68 |
| Zm00001d041705_P001 | Maize | cytosol, mitochondrion | 9.56 | 50.47 |
| GSMUA_Achr7P23220_001 | Banana | cytosol | 43.36 | 49.0 |
| GSMUA_Achr9P08580_001 | Banana | cytosol, plasma membrane | 39.12 | 48.46 |
| Zm00001d005304_P001 | Maize | mitochondrion | 22.83 | 47.43 |
| Zm00001d005249_P001 | Maize | mitochondrion | 23.19 | 47.29 |
| Solyc11g051160.1.1 | Tomato | extracellular, plastid | 48.5 | 46.52 |
| CDX90715 | Canola | cytosol | 25.31 | 46.13 |
| VIT_18s0041g00430.t01 | Wine grape | cytosol | 49.03 | 45.71 |
| Solyc06g064940.2.1 | Tomato | nucleus | 46.9 | 45.69 |
| PGSC0003DMT400013297 | Potato | cytosol | 46.19 | 45.23 |
| GSMUA_Achr6P18780_001 | Banana | cytosol | 45.66 | 44.48 |
| GSMUA_Achr6P07270_001 | Banana | cytosol, nucleus, plastid | 40.53 | 44.04 |
| Zm00001d043169_P001 | Maize | cytosol | 16.28 | 43.6 |
| KRH44929 | Soybean | endoplasmic reticulum | 44.42 | 43.58 |
| Zm00001d012254_P003 | Maize | mitochondrion | 42.83 | 43.53 |
| KRH23751 | Soybean | endoplasmic reticulum | 46.55 | 43.4 |
| CDX82180 | Canola | nucleus | 37.17 | 42.94 |
| CDY50441 | Canola | plasma membrane | 36.81 | 42.89 |
| CDY03654 | Canola | nucleus | 36.99 | 42.74 |
| GSMUA_Achr5P25970_001 | Banana | cytosol | 41.95 | 42.7 |
| TraesCS3B01G417500.1 | Wheat | golgi | 43.19 | 42.21 |
| TraesCS3A01G385300.1 | Wheat | cytosol | 43.19 | 42.21 |
| GSMUA_Achr3P22170_001 | Banana | cytosol | 39.12 | 42.02 |
| Zm00001d042664_P001 | Maize | plasma membrane | 42.3 | 41.86 |
| CDX68278 | Canola | cytosol | 32.21 | 41.46 |
| TraesCS3D01G378300.1 | Wheat | cytosol | 43.01 | 41.4 |
| KXG33790 | Sorghum | cytosol | 43.19 | 41.36 |
| Os01t0874700-01 | Rice | plasma membrane | 44.6 | 41.11 |
| Os05t0429400-01 | Rice | plasma membrane | 42.48 | 41.03 |
| EES10230 | Sorghum | cytosol | 37.17 | 41.02 |
| OQU78068 | Sorghum | cytosol | 36.28 | 38.97 |
| Zm00001d038262_P001 | Maize | plasma membrane | 42.48 | 38.71 |
| TraesCS1B01G279200.1 | Wheat | cytosol | 41.77 | 38.69 |
| CDY29572 | Canola | cytosol, plastid | 18.94 | 38.63 |
| CDX78958 | Canola | cytosol, plastid | 18.94 | 38.63 |
| CDY13832 | Canola | cytosol, plastid | 18.94 | 38.63 |
| CDX73635 | Canola | cytosol, plastid | 18.94 | 38.63 |
| TraesCS1D01G268600.1 | Wheat | golgi | 41.42 | 38.36 |
| TraesCS1A01G268500.1 | Wheat | cytosol | 41.24 | 38.2 |
| CDX78026 | Canola | cytosol, plastid | 27.43 | 37.62 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plastid | 41.59 | 37.6 |
| CDX73705 | Canola | cytosol, plastid | 27.26 | 37.38 |
| Zm00001d010205_P002 | Maize | cytosol | 35.58 | 37.29 |
| HORVU3Hr1G082110.2 | Barley | plastid | 42.3 | 37.05 |
| CDX90637 | Canola | cytosol | 25.49 | 35.82 |
| HORVU1Hr1G075150.4 | Barley | plasma membrane | 41.77 | 35.54 |
| CDY02316 | Canola | cytosol | 26.73 | 35.03 |
| CDY09549 | Canola | nucleus | 32.39 | 34.21 |
| CDX77578 | Canola | cytosol | 32.04 | 34.02 |
| CDY50723 | Canola | nucleus | 31.5 | 33.58 |
| CDY05051 | Canola | nucleus | 33.98 | 27.67 |
| CDY29036 | Canola | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 25.31 | 23.99 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078ENY4 | EnsemblPlants:CDY03655 | ProteinID:CDY03655 | ProteinID:CDY03655.1 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | InterPro:GOLD_dom |
| InterPro:GOLD_dom_sf | EnsemblPlantsGene:GSBRNA2T00116439001 | InterPro:IPR001251 | InterPro:IPR009038 | InterPro:IPR036865 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | PFscan:PS50866 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF96 | SMART:SM00516 |
| SMART:SM01100 | SUPFAM:SSF101576 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EEB3BD | SEG:seg |
Description
BnaA02g15820D
Coordinates
chrLK031945:-:224590..226823
Molecular Weight (calculated)
62993.1 Da
IEP (calculated)
4.483
GRAVY (calculated)
-0.566
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQEEAQKSA DVVAVAVATT DKEVTVPAPV PEKEVTAPVA SEEKAVPEKE TSEAEAEKSV PVKEEETVVA EKVIAPSPEE LEKKALEEFK ELVREALNKR
101: EFTPPAPPVK EEKTEEKKAA EETKGEEKTE EKKEEEKLEE AVKVEEKSSD DVAPEETKPE EKLEEPEEKA AVQATVTTTE KASGAEEDGT KTVEAIEESI
201: VSVTPPESSA APVVVETTVV AEPIEPEEVS IYGVPLLEDE RSDTILLKFL RARDFKVKEA LTMLKNTVQW RKENKIDELV EAEAGEEASE FEKMVFAHGV
301: DKEGHVVIYS SYGEFQNKEI FSDKEKLNKF LNWRIQLQEK CVRALDFSSP DAKSSFVYVS DFRNAPGLGK RALWQFIRRA VKQFEDNYPE FATRELFINV
401: PWWYIPYYKT FGSIITSPRT RSKMVLAGPS KSADTIFKYI APEQVPVKYG GLSNEIGGDS VTEAIVKPAA KYTIELPASE ACTLSWELRV LGADVTYGAQ
501: FEPTTEGSYD VIVSKNRKIG LTDEPVITGS FKAGEPGKIV ITIDNQTSKK KKVLYRFKTQ PRSDL
101: EFTPPAPPVK EEKTEEKKAA EETKGEEKTE EKKEEEKLEE AVKVEEKSSD DVAPEETKPE EKLEEPEEKA AVQATVTTTE KASGAEEDGT KTVEAIEESI
201: VSVTPPESSA APVVVETTVV AEPIEPEEVS IYGVPLLEDE RSDTILLKFL RARDFKVKEA LTMLKNTVQW RKENKIDELV EAEAGEEASE FEKMVFAHGV
301: DKEGHVVIYS SYGEFQNKEI FSDKEKLNKF LNWRIQLQEK CVRALDFSSP DAKSSFVYVS DFRNAPGLGK RALWQFIRRA VKQFEDNYPE FATRELFINV
401: PWWYIPYYKT FGSIITSPRT RSKMVLAGPS KSADTIFKYI APEQVPVKYG GLSNEIGGDS VTEAIVKPAA KYTIELPASE ACTLSWELRV LGADVTYGAQ
501: FEPTTEGSYD VIVSKNRKIG LTDEPVITGS FKAGEPGKIV ITIDNQTSKK KKVLYRFKTQ PRSDL
001: MAQEEVQKSA DVAAAPVVKE KPITDKEVTI PTPVAEKEEV AAPVSDEKAV PEKEVTPEKE APAAEAEKSV SVKEEETVVV AEKVVVLTAE EVQKKALEEF
101: KELVREALNK REFTAPVTPV KEEKTEEKKT EEETKEEEKT EEKKEETTTE VKVEEEKPAV PAAEEEKSSE AAPVETKSEE KPEEKAEVTT EKASSAEEDG
201: TKTVEAIEES IVSVSPPESA VAPVVVETVA VAEAEPVEPE EVSIWGVPLL QDERSDVILT KFLRARDFKV KEALTMLKNT VQWRKENKID ELVESGEEVS
301: EFEKMVFAHG VDKEGHVVIY SSYGEFQNKE LFSDKEKLNK FLSWRIQLQE KCVRAIDFSN PEAKSSFVFV SDFRNAPGLG KRALWQFIRR AVKQFEDNYP
401: EFAAKELFIN VPWWYIPYYK TFGSIITSPR TRSKMVLAGP SKSADTIFKY IAPEQVPVKY GGLSKDTPLT EETITEAIVK PAANYTIELP ASEACTLSWE
501: LRVLGADVSY GAQFEPTTEG SYAVIVSKTR KIGSTDEPVI TDSFKVGEPG KIVITIDNQT SKKKKVLYRF KTQ
101: KELVREALNK REFTAPVTPV KEEKTEEKKT EEETKEEEKT EEKKEETTTE VKVEEEKPAV PAAEEEKSSE AAPVETKSEE KPEEKAEVTT EKASSAEEDG
201: TKTVEAIEES IVSVSPPESA VAPVVVETVA VAEAEPVEPE EVSIWGVPLL QDERSDVILT KFLRARDFKV KEALTMLKNT VQWRKENKID ELVESGEEVS
301: EFEKMVFAHG VDKEGHVVIY SSYGEFQNKE LFSDKEKLNK FLSWRIQLQE KCVRAIDFSN PEAKSSFVFV SDFRNAPGLG KRALWQFIRR AVKQFEDNYP
401: EFAAKELFIN VPWWYIPYYK TFGSIITSPR TRSKMVLAGP SKSADTIFKY IAPEQVPVKY GGLSKDTPLT EETITEAIVK PAANYTIELP ASEACTLSWE
501: LRVLGADVSY GAQFEPTTEG SYAVIVSKTR KIGSTDEPVI TDSFKVGEPG KIVITIDNQT SKKKKVLYRF KTQ
Arabidopsis Description
PATL1Patellin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.