CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71842	Canola	cytosol	89.51	53.22
CDX68279	Canola	cytosol	87.06	46.89
CDX96377	Canola	cytosol	89.16	45.86
CDY03655	Canola	cytosol	87.06	44.07
CDX82182	Canola	cytosol	85.66	42.61
AT1G72150.1	Thale cress	cytosol	80.07	39.97
KRG99105	Soybean	cytosol	17.13	33.11
CDY29572	Canola	cytosol, plastid	30.77	31.77
CDX73635	Canola	cytosol, plastid	30.77	31.77
CDY13832	Canola	cytosol, plastid	30.77	31.77
CDX78958	Canola	cytosol, plastid	30.77	31.77
CDY66581	Canola	cytosol	66.78	30.51
CDY21368	Canola	cytosol	67.48	29.6
GSMUA_Achr9P08580_001	Banana	cytosol, plasma membrane	44.76	28.07
HORVU3Hr1G082150.1	Barley	cytosol	33.22	27.62
GSMUA_Achr7P23220_001	Banana	cytosol	47.55	27.2
GSMUA_Achr2P08100_001	Banana	cytosol	36.36	26.2
CDY50441	Canola	plasma membrane	43.01	25.36
Solyc06g064940.2.1	Tomato	nucleus	51.05	25.17
Solyc11g051160.1.1	Tomato	extracellular, plastid	51.4	24.96
PGSC0003DMT400013297	Potato	cytosol	50.0	24.78
CDX82180	Canola	nucleus	42.31	24.74
CDY03654	Canola	nucleus	41.96	24.54
GSMUA_Achr6P18780_001	Banana	cytosol	48.6	23.97
KRH44929	Soybean	endoplasmic reticulum	47.9	23.78
Zm00001d043169_P001	Maize	cytosol	17.48	23.7
GSMUA_Achr3P22170_001	Banana	cytosol	43.01	23.38
GSMUA_Achr6P07270_001	Banana	cytosol, nucleus, plastid	42.31	23.27
KRH23751	Soybean	endoplasmic reticulum	47.9	22.61
GSMUA_Achr5P25970_001	Banana	cytosol	43.71	22.52
EES10230	Sorghum	cytosol	40.21	22.46
CDX78026	Canola	cytosol, plastid	31.82	22.09
CDX73705	Canola	cytosol, plastid	31.82	22.09
Zm00001d012254_P003	Maize	mitochondrion	42.31	21.76
CDX68278	Canola	cytosol	33.22	21.64
VIT_18s0041g00430.t01	Wine grape	cytosol	45.1	21.29
TraesCS3B01G417500.1	Wheat	golgi	43.01	21.28
TraesCS3A01G385300.1	Wheat	cytosol	43.01	21.28
TraesCS3D01G378300.1	Wheat	cytosol	43.01	20.95
Zm00001d042664_P001	Maize	plasma membrane	41.26	20.67
CDX90637	Canola	cytosol	28.67	20.4
KXG33790	Sorghum	cytosol	41.96	20.34
CDX90715	Canola	cytosol	21.68	20.0
Zm00001d038262_P001	Maize	plasma membrane	43.36	20.0
Os01t0874700-01	Rice	plasma membrane	42.66	19.9
Zm00001d005249_P001	Maize	mitochondrion	19.23	19.86
Zm00001d005304_P001	Maize	mitochondrion	18.88	19.85
Os05t0429400-01	Rice	plasma membrane	40.56	19.83
TraesCS1B01G279200.1	Wheat	cytosol	40.91	19.18
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	41.61	19.04
HORVU3Hr1G082110.2	Barley	plastid	42.66	18.91
TraesCS1D01G268600.1	Wheat	golgi	40.21	18.85
TraesCS1A01G268500.1	Wheat	cytosol	39.86	18.69
CDY02316	Canola	cytosol	27.27	18.1
OQU78068	Sorghum	cytosol	33.22	18.06
HORVU1Hr1G075150.4	Barley	plasma membrane	40.56	17.47
Zm00001d010205_P002	Maize	cytosol	31.82	16.88
CDY09549	Canola	nucleus	30.77	16.45
CDY50723	Canola	nucleus	30.07	16.23
CDX77578	Canola	cytosol	29.37	15.79
CDY05051	Canola	nucleus	37.76	15.56
CDY29036	Canola	cytosol, endoplasmic reticulum, mitochondrion, nucleus	27.62	13.26
Zm00001d041705_P001	Maize	cytosol, mitochondrion	1.4	3.74
CDY58916	Canola	cytosol	1.75	3.62

Protein Annotations

EnsemblPlants:CDY71835	EnsemblPlantsGene:GSBRNA2T00020665001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF96	PFAM:PF00650
PFAM:PF03765	ProteinID:CDY71835	ProteinID:CDY71835.1	SEG:seg	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0004EDBBD6	UniProt:A0A078JZQ2	MapMan:35.1	:	:

Description

BnaCnng74720DBnaCnng74720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZQ2]

Coordinates

chrLK047732:+:780..1913

Molecular Weight (calculated)

32728.0 Da

IEP (calculated)

4.941

GRAVY (calculated)

-0.483

Length

286 amino acids

Sequence
(BLAST)

001: MAQEEAQKSA DVVVTTEKPM TDKEVTVPSP VLEKEVTPTV ASEEKVAPET EKSVPVREEE TVVAEKVIVP SPEELEKKAL AEFKELVREA LNKREFTSPP
101: EEVSIYGVPL LQDERSDVIL LKFLRARDFK VKEALTMLKN TVQWRKEIKI DELVEAKAGE EASEFEKMVI AHGVDKEGHV VIYSSYGEFQ NKELFSDKEK
201: LNKFLNWRIQ LQEKCVRALD FSSPDAKSSF VFVSDFRNAP GLGKRALWQF IRRAVKQFED NYPEFATREV RNSVTHITLI QTSFSQ

Best Arabidopsis Sequence Match ( AT1G22530.1 )
(BLAST)

001: MAQEEIQKPT ASVPVVKEET PAPVKEVEVP VTTEKAVAAP APEATEEKVV SEVAVPETEV TAVKEEEVAT GKEILQSESF KEEGYLASEL QEAEKNALAE
101: LKELVREALN KREFTAPPPP PAPVKEEKVE EKKTEETEEK KEEVKTEEKS LEAETKEEEK SAAPATVETK KEEILAAPAP IVAETKKEET PVAPAPVETK
201: PAAPVVAETK KEEILPAAPV TTETKVEEKV VPVETTPAAP VTTETKEEEK AAPVTTETKE EEKAAPGETK KEEKATASTQ VKRASKFIKD IFVSVTTSEK
301: KKEEEKPAVV TIEKAFAADQ EEETKTVEAV EESIVSITLP ETAAYVEPEE VSIWGIPLLE DERSDVILLK FLRARDFKVK EAFTMLKNTV QWRKENKIDD
401: LVSEDLEGSE FEKLVFTHGV DKQGHVVIYS SYGEFQNKEI FSDKEKLSKF LKWRIQFQEK CVRSLDFSPE AKSSFVFVSD FRNAPGLGQR ALWQFIKRAV
501: KQFEDNYPEF VAKELFINVP WWYIPYYKTF GSIITSPRTR SKMVLSGPSK SAETIFKYVA PEVVPVKYGG LSKDSPFTVE DGVTEAVVKS TSKYTIDLPA
601: TEGSTLSWEL RVLGADVSYG AQFEPSNEAS YTVIVSKNRK VGLTDEPVIT DSFKASEAGK VVITIDNQTF KKKKVLYRSK TQA

Arabidopsis Description

PATL2Patellin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56ZI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.